Gene Rru_A0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0865 
Symbol 
ID3834342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1032303 
End bp1034465 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content61% 
IMG OID637824953 
ProductTonB-dependent receptor 
Protein accessionYP_425953 
Protein GI83592201 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0447976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTCA GTCGCATCAT TGAGCAGCGG ATGCGTGGTC GGTTTTTGTC CGGGGGAGTT 
TGGAACGTGG TGTCTGAGAT GAATCGCCGT CGGGCGCTGC CCGCCGTCCT AAGCCTTGCC
GTAGCCCAGA TGGTCGGCGC GACGGTGGCT GTGGCCGACG ACCGCAAGGA AACCGCCCAA
GAGGTCCAGG TGGCGGGGAG CGGCGAGGTC TACCAACTTC AGCCGGTGAC CGTCACCGCC
GAAAAGATGA CCTCCACCGA TCAGGATACG CCGGTCAGTA TGACCGTGGT CACGGGCGAG
GACCTTGAAC GCTCCGCCGC CAAGGACACC ATCGACATCG TTCGCCAAGT TCCCAACATG
TATATGACCA AGGCCGGACA GCACGCCAGT GTCGCTTTCC TGTCGATGCG CGGCGTCACG
CCCTTCATGG AGGCCGAGCA GCCGGTGGGC TTTTTCGTTG ATGGGGTTCA TTACCGCAAC
GTCGACATGG AGTTGCTTGA TATCGACCGG GTCGAGGTGT TGCGCGGTCC CCAATCCACC
CTTTACGGCC GCAACACCGA GGCCGGCGCC GTCACTATCA TCACCCGCGA TCCCGAACCC
CATCAGGAAG GGCAGGTGTC GGTGGGGATC GGCAATTACA ACCGAAAAAC GATCAGCGGC
ATCACCGGCG GGCCTTTGGG AAGCGAAGAT TGGTCTTATC GCGCGGCGGT GCAGTTTCTC
GACAGCGATG GCTATTTCAC CCGTGAGCCC GACGGCGCCG ATGACGTGGA CGATGCCACC
AATGTGAACG CCCGTTTCAA GGTTCGCTGG CAACCCCAGC AGGCCTGGGA CGTGATCGCC
ACCTATGACG GGGCGCGCTA TCGGGAAGGC TCGACCAACA TCGCCCCCCT CAGCGCCTTA
CGCGAGGACT CCCACAAGGT CTCGTCCAAT TACATCGGCT CGAACGACAG CGATGTTCAC
GGCGGCAACG TTCGGGCGGT CTATGAGGCG CCCGCCGTCA CGGTGACCTC GATCTCGGCC
TATGGCTATG AAAACAAGGA CACGACCTAT GACGTCGATG GCAGCGCCCT TGATCTGATG
CGCCTGCGGA CCGGCGTGGA TTATTCCCGC TTCACCCAGG AACTGCGCCT GAGTTCTCCG
GAAGGCGCCA GCGGGCCGCG CTGGGTGGGC GGCGTCTATT ACTTCGATCA GACCGACCAC
AATGATATCG ATATGACCAT GACCGGCATG GGAATGGGCG TCCAGTCGGT CCGCACGACG
ACCGACACCC GCAATATGGC GGCCTTCGGT CAGGTCACTT GGCCGCTGAT CGACAGCCTC
TCGCTGATCA CCGGTCTGCG CTATGACCAT GAACGCAAGG ACGTCGAAAG CCAGCAGACC
TGGGCGGCCA TGGGGCGCGA TACCGGCGTG GATCAGGATA TGACCTTTCA CGCTTGGCTG
CCCAAGGTCG GCCTGGAATA CAAGCCGTTT CCCACTCTGC TAACCTATGC CACCTATTCC
GGCGGCTATA AGGCCGGCGG CTTCAATAAC TTGGCTGATC CGGGGAACGA GAAATACGAC
GCCGAATACA CCCGGAACTA TGAAATCGGC GTCAAACACA CCGCTTTGGA CAACACGCTG
TCGACCAAGC TGTCCTTGTT CTGGATCGAC TGGACCGACC AGCAGGTCGA GGAATTGATC
CTTTCGCAGT CCAATATTTC CAACGCCGGC CAAAGCGTCA GCCGGGGCGT GGAACTGGAG
CTGGCTTGGA AAGCCACCAA GGCCTTGTTG CTGAAAGCCG GGGCCGGCTG GAACGACGCC
CATTTCACCA AATATGAGGA CAACGGCACG GATTTCTCGG GGAAGCGTCC GCCGAACGCC
CCGGCCTATA CCTATAGCCT TGGCGCGGAT TACAGCTTTG AGAATGGCCT TTATGCCCAT
GCCGACTGGT TGGGCACGGG CGAGGTTTAC TTTAATTCGG CCAATACCCA GAAGGAACGG
CCCTATGGCC TGCTCAATCT GAAGACCGGT TATCAGGGCG AAAGCTACGA GGTGGCCTTG
TGGGTCAAGA ACGCCCTCGA TGCCGATTAC GCCACCCGTG CCTTCGATCT GGGCGGCGGC
ACCTATGGCG GCATCGCCGG CGATCCGCGA ACCTTCGGCA TGACCGTGAC GGCGCGGTGG
TGA
 
Protein sequence
MPLSRIIEQR MRGRFLSGGV WNVVSEMNRR RALPAVLSLA VAQMVGATVA VADDRKETAQ 
EVQVAGSGEV YQLQPVTVTA EKMTSTDQDT PVSMTVVTGE DLERSAAKDT IDIVRQVPNM
YMTKAGQHAS VAFLSMRGVT PFMEAEQPVG FFVDGVHYRN VDMELLDIDR VEVLRGPQST
LYGRNTEAGA VTIITRDPEP HQEGQVSVGI GNYNRKTISG ITGGPLGSED WSYRAAVQFL
DSDGYFTREP DGADDVDDAT NVNARFKVRW QPQQAWDVIA TYDGARYREG STNIAPLSAL
REDSHKVSSN YIGSNDSDVH GGNVRAVYEA PAVTVTSISA YGYENKDTTY DVDGSALDLM
RLRTGVDYSR FTQELRLSSP EGASGPRWVG GVYYFDQTDH NDIDMTMTGM GMGVQSVRTT
TDTRNMAAFG QVTWPLIDSL SLITGLRYDH ERKDVESQQT WAAMGRDTGV DQDMTFHAWL
PKVGLEYKPF PTLLTYATYS GGYKAGGFNN LADPGNEKYD AEYTRNYEIG VKHTALDNTL
STKLSLFWID WTDQQVEELI LSQSNISNAG QSVSRGVELE LAWKATKALL LKAGAGWNDA
HFTKYEDNGT DFSGKRPPNA PAYTYSLGAD YSFENGLYAH ADWLGTGEVY FNSANTQKER
PYGLLNLKTG YQGESYEVAL WVKNALDADY ATRAFDLGGG TYGGIAGDPR TFGMTVTARW