| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0860 |
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| Symbol | |
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| ID | 3834337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1025255 |
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| End bp | 1026727 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637824948 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_425948 |
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| Protein GI | 83592196 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGG CATTCCTGGT CGCACCGTCG CTGATCGCGC TGATCCTGGG CGGCTGCGCC
CCGTGGGACG GGATCGACCG CCAGTCGGCG ATGACCGACG CCAAGACCCT GGCCCTGTCC
GCGCCCTCCG ATCCCATTCC CGAAGTCGCC CCCTGGCCGG AGGGGGAGTG GTGGCGCGGC
TATCATGACG CGCAGTTAAA CCAGTTGATT GGCGAAGCCC TGGCCGGCAA TCCCTCCCTC
AAGGTCGCCC AGGCGCGCCT CCGCCGCGCT GGCGCCCTGG CCGGTCTGGC CGAGGCCGCG
CTCTCCCCTC ACCTTGATGG CGGGGCGTCG ATCATTGATC AGCGGTTCAA TGAGGGCGGC
CTCTATCCCG ACTCCTTGGC CGGCAAGGTC AAGACCGAGA ACAAGATCGC CCTGGAGGGC
GCCTATACCC TCGACCTGTG GGGGGGCCGC GAGGCCGAGT ACCGATCCGC CCTGGGGGAG
CTCCGCGCCA GCGAGATCGA CGCCCAGGCC GCCCGACTCG ACCTCGCCGC CGCGATCGCC
CAAAGCTACG CCCGCTTGGC CGCGGCCTTC GACCAACGCG ACATCAGCCA CGAGGTGCTG
CGCCAGAAAC AGGAGATCCA GGCCCTGACC GCCCGACAAG TGCGGTCCGG ATTGGTCACC
GAGGTCGAAA CCCGTCAGGC CGATGCCGCC ATCGCCGCCG CCCGGGCCGA TATCGCCGGC
GACGAGGAAC GCATCAGCTT GCTGCGGCGC GATCTGGCTG TTTTGACCGG CGCCGGTCCC
GACCGTGGCG CGGCCATCAC CCGCCCCGGC CTGAGCATGA GGGCGGGTGT CGGCCTGCCC
TCGACCCTGC CGGCGGATCT GATCGGCCGC CGTCCCGATA TCGTCGCCCA TCGCTGGCGG
ATCGAGGCGG CGACGCGGAG CATCGACGCC GCCAAGGCCC GATTTTATCC CAATGTCGAT
CTGACGGCCT TCCTGGGCTT CAAGTCGATC GGGCTGGCCA ACTTCATGAC GGCGGGCAGC
TTCATGGCCG GCGCCGGACC GGCGATCACC TTGCCGATCT TCGATGCCGG GCGGTTGCGG
AGTCAGTTGG CCGAGGCGAA CGCCACCCTC GACATCACCG TCGAACTCTA CAACGGCGCC
GTCCTCGAGG CGCTGCGCGA CATCGTCGGG TCTCTCACCT CCTGGCGGGC CAATCAGGCG
CGGTTGGCGG AGAAAAGCCT CGCGGTGGCC TCTTTGGAGG AAGCCTATCG TCTGGCCCTG
CTGCGCTACC GCGAGGGACT GGCCAACTAC CTAACGGTTT TGTCGGCCGA AACCGCGCTG
ATCGCCGAGC GCCGCCAGGA AGCGGAGTTC CGCAATCGCC AATACGGCCT TTCGATCGCG
CTGGCCCATG CCCTGGGGGG CGGCTTCGCC CCCCAGGGTC CGCCGCCGTC TCGGGCGGCG
AGCGGGGACC CCGCTCCCCG CGCACCGCTC TAA
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| Protein sequence | MNMAFLVAPS LIALILGGCA PWDGIDRQSA MTDAKTLALS APSDPIPEVA PWPEGEWWRG
YHDAQLNQLI GEALAGNPSL KVAQARLRRA GALAGLAEAA LSPHLDGGAS IIDQRFNEGG
LYPDSLAGKV KTENKIALEG AYTLDLWGGR EAEYRSALGE LRASEIDAQA ARLDLAAAIA
QSYARLAAAF DQRDISHEVL RQKQEIQALT ARQVRSGLVT EVETRQADAA IAAARADIAG
DEERISLLRR DLAVLTGAGP DRGAAITRPG LSMRAGVGLP STLPADLIGR RPDIVAHRWR
IEAATRSIDA AKARFYPNVD LTAFLGFKSI GLANFMTAGS FMAGAGPAIT LPIFDAGRLR
SQLAEANATL DITVELYNGA VLEALRDIVG SLTSWRANQA RLAEKSLAVA SLEEAYRLAL
LRYREGLANY LTVLSAETAL IAERRQEAEF RNRQYGLSIA LAHALGGGFA PQGPPPSRAA
SGDPAPRAPL
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