Gene Rru_A0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0757 
Symbol 
ID3834166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp889755 
End bp890321 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID637824842 
Productisochorismatase hydrolase 
Protein accessionYP_425848 
Protein GI83592096 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000750492 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTT CCGATACCGC CCTGCTGGTG ATCGACGCCC AGGAGTCCTT TCGCCACCGC 
CCCACTTGGC ACGAGGGCGA CGTCGCGCCC TTCGTTGATC GGCTTCAGGC GCTGATCGAT
GGGGCGCGAC GCCGGGACAT TCCCGTCGTT CAGATTTTCC ATATCGACGA CGAGGGGCCC
TTCAGCCAAG CCTCGGGCCA TGTGGTGACC CTGGCGCCGC TGACCCTCGC CCCCGACGCG
GTCTTTCGCA AGCGCCGCCA CAGCGCCTTG ATCGGCAGCG GGCTTGACGT CTGGCTGATC
AGCAAGGGCG TTCGTCGGAT CATCGTCGCC GGCATTCGCA CCGAGCAGTG CTGCGAGACG
ACGACCCGTC ACGCCTCGGA CCTTGGCTAT GACGTTGATT TCGTCAGCGA GGCGACCTTG
ACCTTCGCCA TGACCGATGC CCAGGGCCGG GTATGGAGCG CCGAGGAGAT CAAGGCCCGC
ACCGAGCTGG TTCTGGCCGA CCGCTTCGCC CGCATCGCCA CCGTCGAGGC GGCTTTGGCC
GGTCCCCTGG TCCCCGCCGC CCGATGA
 
Protein sequence
MSASDTALLV IDAQESFRHR PTWHEGDVAP FVDRLQALID GARRRDIPVV QIFHIDDEGP 
FSQASGHVVT LAPLTLAPDA VFRKRRHSAL IGSGLDVWLI SKGVRRIIVA GIRTEQCCET
TTRHASDLGY DVDFVSEATL TFAMTDAQGR VWSAEEIKAR TELVLADRFA RIATVEAALA
GPLVPAAR