Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0427 |
Symbol | |
ID | 3833993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 499592 |
End bp | 500362 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637824511 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_425519 |
Protein GI | 83591767 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTC CGCGAACGAT CCTGATCACC GGCGCCTCCA GCGGCCTGGG GGCGGCGCTG GCGCGCGGCT ATGCCCGCCC CGGCCGGCGG CTGGTTCTGG GCGCCCGCCG CGCCGAGGCC CTGGCGGCGA TCGCCCAAGA TTGCCGGGCC GCCGGCGCCA TCGTTGAAAC CGCCCTGGTC GATGTGACCG ACCGCGCCGC CACCGCCGCC TGGGTCATCG CCGCCGACGA GGCCGGAGCC CTGGATCTGG TCATCGCCAA TGCGGGAATT TCCGGGGGAA CCGGCGGCGG CGGCGAGGCC GCCGAGCAAA CCCGGGCGCT GTTCGCCGTC AATGTCGACG GCCTGTTCAA CACCCTCTTG CCGATTATCC CGCGCTTTCG CGCCCGCAAG CGCGGCCAGA TCGCCGTGAT GGCCTCGCTC GCCAGCTTTC GCGGCACCCC GGGCGCCCCG GCCTATTGCG CGAGCAAGGC TGCGGTCAAG GTCTGGGGGG AAGGGATGCG CGGCGTTCTG GCCGACGACG GCGTCGAGCT CAGCGTCATC TGCCCGGGCT TCGTGCGCAC GCCGATGACG GCGGTCAATG AGTTCCCCAT GCCCTTCCTG ATGGAGGCCG ACAAGGCGGC CCGGCTGATC GCCCGCCGGC TGGAAGCCAA TGCCGGGCGC ATCGCCTTCC CCTGGCCGAT GGCCTTCGGC GCCTGGATGA TCGCCGCCCT GCCCGAGGCC CTGGCCGGCC GCCTGCTGGC GCGAACCCCG CGCAAACCCG CCGGTTTCTG A
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Protein sequence | MKSPRTILIT GASSGLGAAL ARGYARPGRR LVLGARRAEA LAAIAQDCRA AGAIVETALV DVTDRAATAA WVIAADEAGA LDLVIANAGI SGGTGGGGEA AEQTRALFAV NVDGLFNTLL PIIPRFRARK RGQIAVMASL ASFRGTPGAP AYCASKAAVK VWGEGMRGVL ADDGVELSVI CPGFVRTPMT AVNEFPMPFL MEADKAARLI ARRLEANAGR IAFPWPMAFG AWMIAALPEA LAGRLLARTP RKPAGF
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