Gene Rru_A0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0388 
Symbol 
ID3833798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp465562 
End bp466524 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID637824471 
Producthypothetical protein 
Protein accessionYP_425480 
Protein GI83591728 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGGCA AAGTCATAAT GGCCAAGGAA TTGGCCCTTC TTCTGATGCT CGCCACCCTG 
TGGGGGGCGT CTTACACCTT CATCAAGATC GGCGTTGAAA CCATCCCGCC GCTGACCCTG 
ATCGCCCTGC GCACGCTGAT CGCCGGGACC CTTCTGGCGG CTATCATCGG CGGGCGCGGG 
CTGCGTTTGC CAAACGACCG GGGGACCTGG GCGCGGTTTC TGGTTCAAGC CTGCCTCAAC 
AGCGCCATCC CCTTCACCTT GATCGCCTGG GCCGAACAAA CGACCGACGC CGGATTGGCG 
GCGATCCTGA ACGCCACCAC CCCGGTTTTC GCCTTCCTGA TGACGGCGCT GATCACCCGC 
CACGAGGCGG TGAGCGGGCG CAAGCTTTTG GGCGTCATCG CCGGTTTGGC CGGCATTGGC 
CTGATCGTCG GCGTTCAGGC GCTGGGCGGC CTGGGGCGGG AGCTTTGGGC CCAACTGGCC 
ATTGTCGCCG CCACGCTGTG CTACGCCGCC GCGGCGATCT TCGGCAAGAC CTTCAAGGGT 
CTGGACCCGA TGATGCCGGC GGCCGGCTCG CTGATCTGCG GCGCGGCGCT CCTTGTTCCG 
CTCAGCCTTG TCGTCGATCA TCCCTGGACC CTTGCCCCCA GCGGGCGCTC CCTGCTGGCG 
CTGCTGGCGC TTTCGGTCTT TTCGACGGCG CTGGCTTTCG CCCTTTATTT CCGCCTGATC 
CAGACCCTCG GATCGATCGG AACAACCGCC CAAGCCTATC TGCGGGTGCC GATCGGCGTC 
GCCATCGGCG TCGTGGTCCT GGGGGAGGAT CTCAGCGCGA CGGCTTGGCT TGGCCTGGGC 
TGCGTTGTCG CCGGGGTCAT CGCCATGACC CTTCCTGGGC GAAAGCCGGC GGAAGGCGCC 
GCGATCAGGC GGGGACGGCA TCCATCAGAA CGACGGTTCC GTCCTGGCGT TGATGGGCGT 
TGA
 
Protein sequence
MVGKVIMAKE LALLLMLATL WGASYTFIKI GVETIPPLTL IALRTLIAGT LLAAIIGGRG 
LRLPNDRGTW ARFLVQACLN SAIPFTLIAW AEQTTDAGLA AILNATTPVF AFLMTALITR 
HEAVSGRKLL GVIAGLAGIG LIVGVQALGG LGRELWAQLA IVAATLCYAA AAIFGKTFKG 
LDPMMPAAGS LICGAALLVP LSLVVDHPWT LAPSGRSLLA LLALSVFSTA LAFALYFRLI 
QTLGSIGTTA QAYLRVPIGV AIGVVVLGED LSATAWLGLG CVVAGVIAMT LPGRKPAEGA 
AIRRGRHPSE RRFRPGVDGR