Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0327 |
Symbol | |
ID | 3834044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 398582 |
End bp | 400444 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824409 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_425419 |
Protein GI | 83591667 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGG TGGGTGCAGG CTCGTTCCAA ACACCAGGCG GGGTGCCGCC CTTACCCCCG CCGCCCCGCG AAGGAGCGAC GGGGCGGTCG TTATCGGCCA AAGCCAGGGC CCCCACCGTC TTGGGCCTGC TGGCCGCCGT CGTCCTTGTC ATGCTCACTC TGGGGCTAGG GGCCAATCTG GTTTTCCTTT ATCGCGACGG CGTGGAGCGC GGCGAGGCCC AGGTTCTGGC GCTGCGCGAT GGCGCGCGCG AACAGGCCGC TGCGGCGGTC TCGCGAATCG ATCTTCTGCT CTCGGGCCTG ACCGAGGGGT TGGCGTTGCG TCCCGAGGTC GAGCGCTGGG GCGATGCGGG CATTCATGCC CTGCTGGTGC GCCAAAGGGC CCTGCTGCCG ATGGTGCGCG GGATCATCGT CACCAATGAG GCCGGGCGGC TGACCCATGA TAGCGAGGCG GCGATTCCGG CGAATATGGA CCTGTCCGAC CGCGATTATG TGCGGGCCTT GCGGGCCGAT CCGCAAAGCG GCCTTTACAT CGGCGAACCG GTGCGCGGGC GCACCTCGGG CCGGTGGTTC ATCAGCATGA GCCGGCGCTT CACCGACCAG CAGGGCGCCT TCAAGGGGGT GGTTACCGCG GTGGTCGATC CGGTGGCCCT GGGGACCGTC TTTTCGCCGT TTCTGCCCGG CGCGGGGGGA GAGTTGGAGG TGCTGCGCGA CGACGGGCGG GTGCTGCTGC ATCTGCCCGA TTTCGAACGC TTCATGGGGG CGGCCCGCGG GCACCAGTCC TTTTTCCGCG ATGTCCTGGC CGCGGCTCCC AGCGGATCCA TCCGGGTCGC GGGCTCGACC GAAGAATCGG TCTATCGCCT GGAGGGCGGA GAGGCCGGGC TGTTCTTCAC CTGGGCGACG GTTCCGGGAT CGCCGCTTCT GGTCACGGTG TCGGCCTCTT ATGACGGGCT GCTGCGCTCC TGGTGGCAGG TCCTGCCCTA TCACCTGGGG GCGATCGCCT GCATCATCCT GGTTATCCTG GCCCTGGTGC TGAAGGTCCA TCGCCAGATC CGCCATCTCA ACGGCTTGAT CGTCGCCCTG TCGAACCGCG AAGCCGCCCT GGTCGCCGCC CGGCGCTCAA GCGAGGAGGC CAATCGCGCC AAAACGCTGT TCCTGGCCAA TATGAGCCAT GAATTGCGCA CGCCGTTGAA CGCCATCATC GGCTTTTCCG ACATGCTGGC GAACGGCATT CACGGCGCCT TGGCCGATCG TCAGCAAGAC TATGCCCGCG ATATCAATCT GTCGGCCCTT CACCTGCTCG ATCTGATCAA CGACATCTTG GATGTCGCCA AGATCGAATC CGGAGGGTAC CTGCTGCACG AGCGGCCGTG CAATCTGGCC GCGATCATCC GCGCCGCCGA GCGCATGCTG GGCCCCCGCG TCCGCGAAAA AGGGCTGGTA ATGGATACGG TCTGCGTCGA TGGCGAGGCC TGGGTGATGG CCGATGAGCG GGCCATGCAG CAGGTGCTGC TCAATCTGCT GTCCAATGCG GTCAAATTCA CCCCCGAGGG CGGGCGGATC ACCGTTTCCC TGGGGTTGAA CGAGGGCGGC GGCATGGTTC TGGTGGTGGG CGACACCGGT CCGGGCATTC CCGCCGAGCA TCTGGCCCTG GTGCTCGAGC CTTTCTATCA GGTGGGCGAG GTGGAAACCC GCAGCCACGA GGGAACCGGC CTGGGCCTGC CGCTGGCCAA GGCCCTGGTC GAAAAGCACG AGGGCGCGCT GCGCCTGGAC AGCCAGCCTG GACAGGGCAC CCGGGTCAGC GTAACCCTGC CCGCCGCCCG CGTTCTGCCG CCGCAACGGC CGCCGGTCGA GGCCAAACCT TGA
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Protein sequence | MMMVGAGSFQ TPGGVPPLPP PPREGATGRS LSAKARAPTV LGLLAAVVLV MLTLGLGANL VFLYRDGVER GEAQVLALRD GAREQAAAAV SRIDLLLSGL TEGLALRPEV ERWGDAGIHA LLVRQRALLP MVRGIIVTNE AGRLTHDSEA AIPANMDLSD RDYVRALRAD PQSGLYIGEP VRGRTSGRWF ISMSRRFTDQ QGAFKGVVTA VVDPVALGTV FSPFLPGAGG ELEVLRDDGR VLLHLPDFER FMGAARGHQS FFRDVLAAAP SGSIRVAGST EESVYRLEGG EAGLFFTWAT VPGSPLLVTV SASYDGLLRS WWQVLPYHLG AIACIILVIL ALVLKVHRQI RHLNGLIVAL SNREAALVAA RRSSEEANRA KTLFLANMSH ELRTPLNAII GFSDMLANGI HGALADRQQD YARDINLSAL HLLDLINDIL DVAKIESGGY LLHERPCNLA AIIRAAERML GPRVREKGLV MDTVCVDGEA WVMADERAMQ QVLLNLLSNA VKFTPEGGRI TVSLGLNEGG GMVLVVGDTG PGIPAEHLAL VLEPFYQVGE VETRSHEGTG LGLPLAKALV EKHEGALRLD SQPGQGTRVS VTLPAARVLP PQRPPVEAKP
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