Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0316 |
Symbol | |
ID | 3833671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 385692 |
End bp | 387377 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637824398 |
Product | NADH-ubiquinone oxidoreductase |
Protein accession | YP_425408 |
Protein GI | 83591656 |
COG category | [C] Energy production and conversion |
COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit [COG3262] Ni,Fe-hydrogenase III component G |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.371145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGC CACAAACCAT TCTCGACGAC ATCAACGCCC GCTTTCCCGG ATGCGTGACC CGCGGCCTCG CCCCCCAGCC CGACCGGCTT TATCTGCGCA CGACCACCGA GCACATCCGG ACGCTCGCCG CCTATGTGTT CAACGACCTC AAAGGCCGGC TGGTCACCGG GGTTTGCACC GACATGGGGC CGGTGACCGG CGAGTACGAC ATCATCTATG CCTTCTCGTT GGACGCCGAG GGCATCCTTC TCACCCTCAC CGAGCCGACC GACCCCAAGG ATCCCAAGGT CCCGACCCTG ACCGATCTGA TCCCGGGCGC CGATTGGCAC GAGCGCGAGA ACTACGACAT GCTGGGCGTG GTCGCCGAAG GCCATCCCAA TCCGCGCCGC CTGCTGCTGT CGGAAGACTG GCCCGAAGAC CTGTTTCCGA TGCGCAAGGA CTTCCCCCAC GACTTCAAGC CGCCCAAGGC CGAGAAGATC ACCACGCCTT TGCGCGACCC GTTGGGCAAC GAAAGCAAGG CGACGATCAT CAGCGTCGGC CCGTTCTTTC CCACCCTGGA TGAGCCGGCC TATTTCCGCC TGTTCTGCGA GGGCGAGGAG ATCATCGGCT CGGATTACCG GGGGTTCTTC TCGCACCGCG GCATCGAAAA GCTCAGCGAT ACGGTCCTTG ATTATAATCA GGTGCCGTTC ATGGCCGAGC GGGTCTGCGG CATCTGCGGC TTCGTTCACA GCGCCTGCTA TTGCATGGCG GTGGAAGACG CCGCCGGCAT CGAGATCCCG CCGCGCGCCA AATACATCCG CTCGATCATG ATGGAACTGG AGCGCCTGCA CAGCCATCTG CTGTGGCTGG GGCTTGCCGG CCATTACCTG GGCTTCGACA CGGTGCTCAT GCAGTCGTGG CGCATCCGCG AGCCGATCAT GTGGCTGGTC GAGGAGATCA CCGGCAACCG CAAGACCTAT GGCATGAATC TGGTGGGCGG CGTGCGCCGC GATCTTGATA GCGCCATCTG CGACAAGATC ATGGCCGCCG TCACCAAGAT CGGCATCGAA TGCGAAGAGC TGATCTCGGC GGTGGCCGGC GATGAGTCGC TGAAGATGCG CATGGTCAAG GTCGGCGTGC TCAGCCACGA GGACGCGCGC GGCATCTGCG TGGTCGGCCC GACCGCCCGC GCCTCGGGCG TCCATATCGA CGCCCGCGCC GATTACCCCT ATGCCGCCTT CCCCGATCTC GATTTCAAGC CGTCGTTCCA CGAGGGCGGC GACATCTGGG CCAGAACCCT GGTGCGGGTC GACGAGGTGC GCTCCTCGGT CGATCTGATC AAGCAGATGA TCACCAAGCT GCCCGAGGGC GAGATCATGG CCGGCTTCGG CCCGATCCCG GCCTGGCGCG AGGGCTATGG CATCGCCGAG GCGCCGCGCG GCGAATGCGT CCATTACGTC CAGACCGGCA AGGACAACCG TCCCTACCGC TGGCGGGTGC GCGCGGCGAC CTATCCGCAG CTTCAGGCGG TGCCCTTGAT GCTCAAGGGC ATGAGCATCG GTGATTTCCC GATCATCATC GGCAGCATCG ATCCCTGCTT CTCGTGCACC GAACGCGTGC TCACGGTCGA TACGAAAAGC AAAGCCATCC GCACCTACAC CGAAAAAGAC CTGCTGGCGC TGACCCGTCG GGCGGGGGGC AGGTAA
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Protein sequence | MTTPQTILDD INARFPGCVT RGLAPQPDRL YLRTTTEHIR TLAAYVFNDL KGRLVTGVCT DMGPVTGEYD IIYAFSLDAE GILLTLTEPT DPKDPKVPTL TDLIPGADWH ERENYDMLGV VAEGHPNPRR LLLSEDWPED LFPMRKDFPH DFKPPKAEKI TTPLRDPLGN ESKATIISVG PFFPTLDEPA YFRLFCEGEE IIGSDYRGFF SHRGIEKLSD TVLDYNQVPF MAERVCGICG FVHSACYCMA VEDAAGIEIP PRAKYIRSIM MELERLHSHL LWLGLAGHYL GFDTVLMQSW RIREPIMWLV EEITGNRKTY GMNLVGGVRR DLDSAICDKI MAAVTKIGIE CEELISAVAG DESLKMRMVK VGVLSHEDAR GICVVGPTAR ASGVHIDARA DYPYAAFPDL DFKPSFHEGG DIWARTLVRV DEVRSSVDLI KQMITKLPEG EIMAGFGPIP AWREGYGIAE APRGECVHYV QTGKDNRPYR WRVRAATYPQ LQAVPLMLKG MSIGDFPIII GSIDPCFSCT ERVLTVDTKS KAIRTYTEKD LLALTRRAGG R
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