Gene Rru_A0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0302 
Symbol 
ID3834459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp368703 
End bp369593 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID637824384 
Producthydrogenase accessory protein HypB 
Protein accessionYP_425394 
Protein GI83591642 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGAGA CCTGCGGTTG CGCCGGCACC GGCCCCCATC ATGTTCACGG CGACCACGCC 
CACAGCCATT CCCACGGCGA CGGCCACACC CATGATCACG CCCACGACCA TGGGCATGGC 
CATTCCCACG ACCACGATCA CGATCACGGG CATGGTCATT CCCATTCCCA CGACCACGAC 
CACGGGCATT CCCATTCCCA CGGTTCCGCC TCGGAGGGGA CGCGGACGGT CATCGTTCTT 
GAAGACCTTT TGGCCAAGAA CGACCATCAG GCGGCCCATG TGCGCGCCCA TTTCGACGCC 
CGGGGCATTC TGGCGGTCAA CCTGATGTCC TCGCCGGGCA GCGGCAAGAC CAGCTTGCTT 
GAAGCCACCA TCCAGGCGCT GCCCGCCGGG GTGCGGGTGG CGGTGATCGA GGGCGATCTG 
GAAACCGAGA ACGATGCCGA GCGCATCCGC CGCCATGGCG TGCCGGCGGT TCAGATCACC 
ACCGGCACCG CCTGCCACCT TGATGCCCAT ATGATCCATG ATGCCCTGCA CCACCTGGAT 
CTTGACGGCA TCGATATCGT CTTCATCGAG AATGTCGGCA ATCTGGTCTG CCCGGCGACC 
TTCGATATCG GCCAGCACCG CAATGTCGTG CTGCTGTCGG TGACCGAAGG CGATGACAAG 
CCGGCGAAAT ATCCGGTGAT CATGCGCGCC GCCGACCGGG TGCTGATCAC CAAGGCCGAT 
CTTTTGCCCC ATATCGAGGA ATTCGACGTC GAGCGCGCCC GCGCCTCGAT CGCCGGCGTC 
GCCGGACCGG TGCCGGTTTG CGTGGTTTCG TCCAAACGCG GTCCGGGCAT GGATGACTGG 
ATCGGCTGGC TGATGGCCGA ACACGCCGCC CGCAAGCCAG CCGTCGCCTG A
 
Protein sequence
MCETCGCAGT GPHHVHGDHA HSHSHGDGHT HDHAHDHGHG HSHDHDHDHG HGHSHSHDHD 
HGHSHSHGSA SEGTRTVIVL EDLLAKNDHQ AAHVRAHFDA RGILAVNLMS SPGSGKTSLL 
EATIQALPAG VRVAVIEGDL ETENDAERIR RHGVPAVQIT TGTACHLDAH MIHDALHHLD 
LDGIDIVFIE NVGNLVCPAT FDIGQHRNVV LLSVTEGDDK PAKYPVIMRA ADRVLITKAD 
LLPHIEEFDV ERARASIAGV AGPVPVCVVS SKRGPGMDDW IGWLMAEHAA RKPAVA