Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0226 |
Symbol | |
ID | 3834620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 278290 |
End bp | 279630 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637824304 |
Product | major facilitator transporter |
Protein accession | YP_425318 |
Protein GI | 83591566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.200681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGCG TTCTGGCTTC CGTATCCCCG CTGGTTGGCG GGGTTGGCGT TCTGCTGCTC GGCGGGGCAT TGCTCAACAC CTTGCTGGGC GTGCGTCTGG CCGACATGGG GGTGGGGGCG ACGGTTTCCG CTCTGGTCAT GGCCGCCTAT TACGCCGGAT TGATCGGCGG GGCTTTGGGC TCGGCCAAGC TGCTTGGCCG TATCGGCCAT ATCCGCAGCT TCGCCGCCCT GGCGGCGCTG TTCTCGGCGG CGACCCTGGC CCACGCCTTT CTGGTCGATC CCTGGAGCTG GGCGGTCCTG CGCCTGATCG AGGGCTTCTC GATGGCCGGG CTGATCACCT GCACGGAAAG CTGGCTGAAT ATGCGGGCCA CCGAACGGAC CCGGGGCACG ATTTTTTCGG TCTATATGAT CGCCACTTAT TTTTCCCAGG GCATCGCCCA GTTCCTGCTG ACCTTTGGCG ATAGCGCCGC CGGGGAAACC GGCGGTTTTC GGCTTTATGC CCTGGTGGCC ATCCTGACCA CGCTGTCGCT GGTGCCGATC GCCGTCACCC GCATGCCCGC GCCCGAGCAG ATCGACACCA CCAGCCTGAG CCTGCGCAAG CTTTACAAGA TCTCGCCGAC CGGGGTCTTC GGCTGCCTGA CCAGCGGCAT GACGCTGGGC TCGTTCTATT CTTTGGGGCC GTTGTTCGCC CGCGAGATCG GCTTCGATCT GGCCCAGGTC GCCACCTTCA TGAGCGCGGT GATCATCGGC GGACTGATCT TGCAATGGCC GCTCGGCCGG CTGTCGGACC GTTTCGATCG GCGGTTGATC ATCATCGGCG CCTGTCTGGC GGTCGCCGTG ACCTGTCTGG CCCTGGGCTT TGGCCAGTTG TCGGGCCTGC CTTTGGCCAG CGGATCGATC CATCAGGCGT TTTTGGGGGT CTCGGTGCTG TTTGGCGCCC TGGTAGCCAC CCTTTATCCG GTGAGCGTCG CCATCGCCAA CGACCGTCTG GCCCCGGCCG AAATGGTCGC CGCCAGCGGC GGATTGCTGT TTTCCTATAG CCTGGGGGCG ATGATCGGTC CGCTGATCGC CTCGTCGGTG ATGGAGGGCG TCGGCCCCGG AGGATTGTTC CTGTGCAGCG CCGCCATCGC CACGCTGATG GCCCTTTATA CGCTGCGCCG CATCCGCTTG CGCGATCCCG CCCCCGAAGA CGAACGGGTT CCCTTTCAGA TCGTCACCAA CCCCCTGCCG ATGGCCAGCG CCGGCGTCGA TGTGCGCAGC GATATCGACG ATCGCCAGAT GAGCTTCGCG TTTTCCGACT CCGCGACCAC CGCCGCCCCG CCGCATTCCG AGGCGGCCTG A
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Protein sequence | MFGVLASVSP LVGGVGVLLL GGALLNTLLG VRLADMGVGA TVSALVMAAY YAGLIGGALG SAKLLGRIGH IRSFAALAAL FSAATLAHAF LVDPWSWAVL RLIEGFSMAG LITCTESWLN MRATERTRGT IFSVYMIATY FSQGIAQFLL TFGDSAAGET GGFRLYALVA ILTTLSLVPI AVTRMPAPEQ IDTTSLSLRK LYKISPTGVF GCLTSGMTLG SFYSLGPLFA REIGFDLAQV ATFMSAVIIG GLILQWPLGR LSDRFDRRLI IIGACLAVAV TCLALGFGQL SGLPLASGSI HQAFLGVSVL FGALVATLYP VSVAIANDRL APAEMVAASG GLLFSYSLGA MIGPLIASSV MEGVGPGGLF LCSAAIATLM ALYTLRRIRL RDPAPEDERV PFQIVTNPLP MASAGVDVRS DIDDRQMSFA FSDSATTAAP PHSEAA
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