| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0137 |
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| Symbol | |
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| ID | 3834545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 160535 |
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| End bp | 161587 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824209 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_425229 |
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| Protein GI | 83591477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.507077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGC GGGGGCTTTT CGCCCTGGTG CCGCAGGTGC TGGGGATGGC CGTCGGCATG
GCGGGCATGG TCGCCCCGGC CGTGGTCCGG CCGTCCAAGG CCCAGGAATT GCGGTTCCTG
CGCATCGGCA CCGGGCGGAC CAGCGGCGCC TATTTCCCGG TCGGCGGGTT GATCGCCAGC
TTGATTTCCA ATCCCCCGGG GTCGCGGCCC TGTGAAAAAG GCGGCTCGTG CGGGGTGCCC
GGCCTGATCG CCGTCGCCCA GTCAACGGGC GGATCGGTCG ATAACATCGT CGGCCTGCAG
TCGGGGCAGC TCGATCTGGC CATTTGTCAG GCCGATGTCG CCTATGACGC TTATAGCCGC
ACCGATGCCA AGGGCGTGCC CGATTTCGCC GAGCTGCGGG CGGTGGCCAG CCTCTATAAG
GAAAGCCTGC ATCTGGTGGC CCGCGTCGAT TCGGGCATTT CCACCCTGGC CGACCTCCGG
GGCAAGCGCG TCGGCTTGGG CGACCCGGCT TCGGGAACCC TGGTTAGCGT GCGCTTGTTG
CTGTCCGCCC TGGGGCTTGG CGAAAAGGCG GTGAAGGCCG ATTACGATCC GCCCTCGGCC
GCCGCCGACA AAGTGGCCGA TGGTCGCCTT GACGCCTTCT TCTTTTTCGG CGGCGAGCCG
GTCGCCCTGA TCACTTCCCT GCGCGAACGC GCCGAGGTGA CGGTGGTGCC GGTCGACGGG
CCGGCGGTCG AGGATCTGGC GGCGCGTTCG CCGTTCCTGA CCCTGGGGCT GATCCGCCAA
CAGGCCTATG ACAACCCCCT GCCGATCGTC ACCTTGCAGG TGGCGGCGGT TCTGGTGACC
CGCGCCGATA TGGACGATGC TTTGATCGAG GCGATCACGG CCGCCCTGTG GCATCGCCAG
ACGAAGATCC TGTTCGAAAA GGGGCCGCCG CAAATCACCC AGGCGACCCT TGGCCAAGCG
GTGCAAGGGA TCGCCGTTCC CCTCCATCCC GGGGCCATGC GCTATTATCG GAAAGAAGGC
ATCATCGACC GGCCTGGTCC GATGCAGCCC TGA
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| Protein sequence | MTRRGLFALV PQVLGMAVGM AGMVAPAVVR PSKAQELRFL RIGTGRTSGA YFPVGGLIAS
LISNPPGSRP CEKGGSCGVP GLIAVAQSTG GSVDNIVGLQ SGQLDLAICQ ADVAYDAYSR
TDAKGVPDFA ELRAVASLYK ESLHLVARVD SGISTLADLR GKRVGLGDPA SGTLVSVRLL
LSALGLGEKA VKADYDPPSA AADKVADGRL DAFFFFGGEP VALITSLRER AEVTVVPVDG
PAVEDLAARS PFLTLGLIRQ QAYDNPLPIV TLQVAAVLVT RADMDDALIE AITAALWHRQ
TKILFEKGPP QITQATLGQA VQGIAVPLHP GAMRYYRKEG IIDRPGPMQP
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