| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0113 |
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| Symbol | |
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| ID | 3833868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 131507 |
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| End bp | 133573 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637824184 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_425205 |
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| Protein GI | 83591453 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00290435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGG AAGGCGAAGA GGGTCGGCGC GGGATGGGGC CGGAGACCCC GGCGAGCGAG
GGACGCCGCC GCACCCTGGC CTCGGCCCTG CGCGAAGAGG ATCGCACCGG GGCCACGGCC
TGGCCGCAGA CCGAGGAGGG CGAGCCCGGA TCCCCGCGCG ACGCTGGCGC CGGCGAGGGG
GGCGTTGTGC CCACGCCCTT GCTGCGGCTG TCTTCGGCCC TGGCCCGGCG GATGGGCGGC
GCCCCCCTCG CCCCGACCCT TGGCCAATCC CTGGAACTGG CCATGGCCGA TCACGCCGAC
GATGAAAAGG CCGACTCCCT GGCCCATTCG GCCCCGCCAC CACCGACGAC CGCGCGCCGC
GCCGCCGCGC CGCCGGCCCT GGTGCCGGCG CTGGGGTTGG GCGATCAGCT GCTGGCCGGC
GGGTTGATCT CACGCGATCA GATGCGGGTG GCCCATATCG AACAAAAGCG CTCCGGGGCG
CCCTTGGGGC AGGTTCTGGT CGATCTTGGG TTCATCACCG ATGGCGTGCT GGCCGAGGTG
CTGGCCCAAA GCAGCGGTCA CGACCGCTTT GACGCCGCGT CGACGCTTGC CGATCCGGCG
GCCCTGGCGC CCTTGCCCGA ACGCGAGGCC CGGCGTTTGC GGGTGTTCCC CGTCGGCCTG
CGCGGCTCGC TGCTGCGCTT GGCCATGGTC GATCCCCTTG ATGTGGTGGC GATCGACGAG
GTGCGCCGCC ACTATGGCCG CGATGTGCGG ATCGAACCGG TGGTGTCGTC GGAGGCCGAG
ATCGCCCAGG CCATCGATCG CAGCTATGGC CATGTCCTGG CCCTTGATGG CGTGCTGCGC
GAGCTTGAAA CCCTGGGGGC GGCCGGCGCC GATCCGGAAA GCTTGCGTGA TACCGACTCC
CACCCGGTGG TGCGGCTGGT CAACGCCCTG CTGCTCGACG CCGTCAAGCG CCGGGCCTCG
GATCTGCATT TCGAGCCCCA AGGGGCCTTT TTGCGGGTGC GCCTGCGCAT CGACGGCACG
CTGAGCCAGA CGCTGATCTT CCATAAGCAA TATTGGCCGG CGGTGGCCCA GCGCCTGAAG
ATCCTGGCCG GAATGAACAT CGCCGACCGC CTGGGGCCCC AGGATGGCCG GTTCTCGATG
GCTATCGCCC ACCGCAAGAT CGACTTCCGC GCCTCGGTCA TCCCCACTGT CCATGGCGAG
AACATGGTGC TGCGCGTGCT CGATCGCTCG GCCACCCCGC TCAAGCTCGA GCAACTGGCC
TTGGCCCATG GCACGCTCGA TCCCCTGGAA CTGCTGGTCC GCCGGCCCGA AGGCCTGCTG
TTGGTCACCG GCCCCACCGG TTCGGGCAAG ACCACCACGC TTTACGCCTT GATGGACCAT
ATCAGCGGCC CCGAGATCAC CATCGTCACC TTGGAGGATC CGGTCGAATA CGACCTGCCG
CTGCTGCGTC AGACCCAGGT GCGCGAAGGG GCGCGGCTGG GCTTCGCCGA TGGCATCCGC
GCCCTGCTGC GCCAGGATCC CGATGTCATG CTGGTCGGCG AGATCCGCGA TGCCGATACC
GCCGCCATGG CCCTGCGCGC GGCGATGACC GGCCATCAGG TCTATGCGAC GCTGCACGCC
AATGACGCGC CTTCGGCCCT GCCGCGGCTG ATGGATCTGG GGCTGCGGCC GGGGCTGCTC
GCCGGCTCGC TGATCGGCGT TCTCGCCCAG CGTCTGGTGC GCCGCCTGTG TCCGCACTGC
CGGCAGAGCT ATCGCGCCTC GCCGGTGGAA TGCAAGATCC TGGGCCTTGA TGCCACGGAT
CCGCCCGAGA TCTTCCGGGC GCGCGGCTGC GAGGCCTGCG GTCAAACCGG CTATCACGGC
CGGGTGCCGA TCAGCGAATT GCTGAGCATT AGCCCCGAGA TCGACGACCT CATCGCCAGC
GCCGCGCCCT TGGCCGAGAT CCGCGCCCTG GCGACCCGTC AGGGCTATCG GCCGATGCTC
GATGACGGGG CGCGGCTGGT CTGCGAGGGG GTGATCGATG TGGCGGCGCT GATGCGCGCC
ATCGACGTGA CCCGCCGGCT GGCCTGA
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| Protein sequence | MTKEGEEGRR GMGPETPASE GRRRTLASAL REEDRTGATA WPQTEEGEPG SPRDAGAGEG
GVVPTPLLRL SSALARRMGG APLAPTLGQS LELAMADHAD DEKADSLAHS APPPPTTARR
AAAPPALVPA LGLGDQLLAG GLISRDQMRV AHIEQKRSGA PLGQVLVDLG FITDGVLAEV
LAQSSGHDRF DAASTLADPA ALAPLPEREA RRLRVFPVGL RGSLLRLAMV DPLDVVAIDE
VRRHYGRDVR IEPVVSSEAE IAQAIDRSYG HVLALDGVLR ELETLGAAGA DPESLRDTDS
HPVVRLVNAL LLDAVKRRAS DLHFEPQGAF LRVRLRIDGT LSQTLIFHKQ YWPAVAQRLK
ILAGMNIADR LGPQDGRFSM AIAHRKIDFR ASVIPTVHGE NMVLRVLDRS ATPLKLEQLA
LAHGTLDPLE LLVRRPEGLL LVTGPTGSGK TTTLYALMDH ISGPEITIVT LEDPVEYDLP
LLRQTQVREG ARLGFADGIR ALLRQDPDVM LVGEIRDADT AAMALRAAMT GHQVYATLHA
NDAPSALPRL MDLGLRPGLL AGSLIGVLAQ RLVRRLCPHC RQSYRASPVE CKILGLDATD
PPEIFRARGC EACGQTGYHG RVPISELLSI SPEIDDLIAS AAPLAEIRAL ATRQGYRPML
DDGARLVCEG VIDVAALMRA IDVTRRLA
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