| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0109 |
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| Symbol | |
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| ID | 3833864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 127711 |
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| End bp | 129354 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824180 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_425201 |
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| Protein GI | 83591449 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.379094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCGC CGGTCCGCCG CATTGCCCTG CTCTGCGCCC TGATGCCGGG CCTGGCGGGC
TGTGAGCCTT TCGATGGCGC CGGCGGCCTG ACCAAAGACG ATTATCGCGC CTTGCTCGCC
CGCCGTGGCG GGGGGCCGTC CCCCCTTCCC GAACCGCCGA TTCCGCCGCT GCTGGAACCC
CAGCTTGCCG CCTTGCCCGC CCCCGAGGAG GCGCGCCGGG TGACGGTGAT CGCCCAAAGC
CCGACGCCGG TGGCCGATCT GCTGGTCGCC CTGTGCCGCG AAGTCGGGGT CGATCTGGAA
ATGAGCCCCG AGGTCGGCGG CCTTGTCGTT CTCTCCCTGC GCGACCGGCC CTTTCCCGAG
GTCGTCGGCC GTTTGGGGGC GATGGCTGGG CTTGATATCA CCCTGGTCGA CGGGGTGGTC
AGGGTCGATC TCGATCGGCC GCTGCCGGCG ATCTACCACC TTGACGCCCT TAACATGGCG
CGCAGTTCGG AAGGCAGCGT CTCGACCAGC ACCGATGTCT TCACCAGCGT TGCCGCCAAG
GGAAACTCTC GCGACAGTCG GGGCAACGCC TCGGCCAGTC TGGTCAGCAG CGCGTCGAAA
GCCGATCTGT GGGGCGAGGT GGCCGGCGGG CTTGGCCAGA TCCTGGGCCG GGCCGAGGGC
GACCCGCTGG CCGAGGAGGC CCGCGACGGC GTGGCGCGCG GTGGGTTTCA CATCAACCGT
CAGGCCGGGC TGATCACCGT CGTCGGCCGC CGCGCCCAGC AGCGCGAGGT GGCCGATTAT
CTGGCCGGGG TGCGCCAATC GATGGCGACC CAGGTGCTGA TCGAAGCCAA GATCGTCGAG
GTCACGCTGA AGGACCAGTA TCGCGGCGGC ATCGATTGGA AGGTGCTGAC CGATGGCGGG
GAATTTCTGC TTGATATCCC GGGAGCGGCC GGGGTGGTCG CCCCGCCTTT GACCGACGCG
GCGGCGACGT TGAGCCTGGG GACGCGGGCC ACGCTGGGTC CGGTGGAGTT ATCGGCACTG
GTACAATTCA TCAAGACCTT CGGCGCCGTG CGCACCCTGT CGAGCCCCCG GCTGACGGTG
ATGAACAATC AGACGGCGGT GCTCAAGGTC GCCGAGAACG AGGTCTATTT CGTTGTCGAT
GTCGATACGG TGACCAGCGA CGGCGTGACC CAGACCACCT ATTCCAGCGA GATCAATACG
GTTCCCATCG GTCTGGTGAT GACCGTCCAG CCCAGTGTCG AGCCCGGCGG CGGCCGCGTC
ACCCTGGGCC TGCGCCCGAC CATCTCGCGC ATCGCCGACC GTGTCGCCGA TCCGGCGGTG
TCGTTGCAAA ACCTGTCGGT GCAATCGCTT ATTCCGGTGG TCGAGGTCCG CGAACTCGAT
TCGGTGGTGA CCATCGACAA TGGCGCCGTG GTGGTGATGG GCGGCCTGAT GCAAGAACGC
ATGGGCCGCG ACGAGGAGGG CGTGCCCGGG TTGGGCGACG TTCCGCTGAT CGGCCGGGCC
TTTCGCCATG ACAGCGCCGA TACGGACGTG GTGGAACTGG TGGTGCTGTT GCGCGCCACC
GTGATCGGCG GCGCCCATAG CCATCCCGCC GATCGCCAGC TTTATCGCAT CTATACCCCC
GATCCCCGGC CCTTGGCGAT GTAG
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| Protein sequence | MRAPVRRIAL LCALMPGLAG CEPFDGAGGL TKDDYRALLA RRGGGPSPLP EPPIPPLLEP
QLAALPAPEE ARRVTVIAQS PTPVADLLVA LCREVGVDLE MSPEVGGLVV LSLRDRPFPE
VVGRLGAMAG LDITLVDGVV RVDLDRPLPA IYHLDALNMA RSSEGSVSTS TDVFTSVAAK
GNSRDSRGNA SASLVSSASK ADLWGEVAGG LGQILGRAEG DPLAEEARDG VARGGFHINR
QAGLITVVGR RAQQREVADY LAGVRQSMAT QVLIEAKIVE VTLKDQYRGG IDWKVLTDGG
EFLLDIPGAA GVVAPPLTDA AATLSLGTRA TLGPVELSAL VQFIKTFGAV RTLSSPRLTV
MNNQTAVLKV AENEVYFVVD VDTVTSDGVT QTTYSSEINT VPIGLVMTVQ PSVEPGGGRV
TLGLRPTISR IADRVADPAV SLQNLSVQSL IPVVEVRELD SVVTIDNGAV VVMGGLMQER
MGRDEEGVPG LGDVPLIGRA FRHDSADTDV VELVVLLRAT VIGGAHSHPA DRQLYRIYTP
DPRPLAM
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