| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0105 |
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| Symbol | |
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| ID | 3833860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 123031 |
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| End bp | 125151 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637824176 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_425197 |
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| Protein GI | 83591445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGC CGGGACGGCG CGGGATCGGG CGATGGCTTC GCCGCCTCGC CCTGGGGGGC
CTGGGGCTGG CGCTGCTTGT CGGCGCCGGC GACCACCTGT TGCCGCCCGA TCTTGGCCGC
CTGACCCCGT CAACCCGGGT GATGGCGGCC AATGGCGCCG TGCTGCGCGC CTTTCTGACC
GCCGAGGGGG CTTGGCGGCT GCCCGGCGAC CCGGCGGCGG TCGATCCCTT CTATCTGGCC
TTGCTCCAGG CCTTTGAGGA CCGGCGCTTC GCCTCTCATC CCGGCGTCGA TCCCTTGGCC
GTCGCGCGGG CGCTTGGGCA ATGGCTGGCC AATGGCAAGG TGATCTCCGG CGCGTCGACC
CTGACCATGC AGACCGTGCG GCTGCTTGAT CCGCGTCCCG AGCGGACCAT CGCCGCCAAA
CTGGTTGAAA TGGTCCGGGC GGTGCAGCTT GAAGCCCATC TCGGCAAGAC CGGCGTGCTG
GGCGCCTATC TGACCCTGGC CCCCTTTGGC GGCAATCTGG AAGGGGTGCG CGCCGGATCG
CTGGCGTGGC TGGGCAAGGA TCCCCGCCGT CTGACCCCGG GCGAGGCGGC CTTGCTGGTC
GCCCTGCCCC AGGCGCCCGA GGCCCTGCGC CCCGACCGCC ATCCCGCCGC CGCGCGGGCG
GCGCGCGACA AGGTGCTGGA GCGGGCGGTG CGCGATGGGC TGCTCGACCC GGCCCAGGCG
CGCGAGGCCA AGGCCGAGCC GGTGCCGACG ACGCGCCGGC CAATGCCGTT TTCCGCCCCC
CATCTGACCG AACGTCTGGC CGCCGGGGCG CCGGCGGGCG CGCCGATCGC CACGACGATC
GACGAGGGGC TGCAAAACCG GCTGGAGCGG TTGGCGCGGC GGGTGGCCGT GCCTTTGGGC
CCCGGGCAAT CGCTGGCCCT GCTGGCCGCC GAATCGGCCA GCGGCCGGAT CCTGGCCAGC
GTCGGCTCGC CCGATTACCT TGATCCGGAG CGGGTGGGGG CGATCGACAT GACGCGGGCG
GTGCGCTCGC CGGGATCGGC GCTCAAGCCG TTGCTTTACG GCATGGCCTT CGAGCGCCAT
ATCGTCCATC CCGAGACGCT GATGATCGAC CGGCCGACGC GCTTTGGCGC TTATACCCCG
GCCAATTTCG GCGATGCCCA TTGGGGGGAG GTCAGCGTGC GCGAGGCCCT GGCCCAATCG
CTCAATGTGC CGGCGGTCAT GCTGCTTGAT CGCCTGGGAC CGCTGGCCTT CGCCACCCGC
TTGCAAAGCG CCGGCATCGC CCTGCGCCTG CCCAAAGGCG TCGAGCGGCC GGGATTGCCC
TTGGCCCTGG GCGGCCTGGG GGTGAGGCTT GAAGATCTGG TGGGCCTGTT CGCCGCGATC
GATGCCGGGG GCGCGGCGCC CCCCTTGCGC GCCCTTGCCG GTGCGCCCTT GCCGGCGCGC
CGGGTGCTTG AGCCGGCGGC GGCTTGGCAG GTCGCCGATA TCCTGGCGGG CAGTCCGCCG
CCCCCGGGGA TGATCCTGGC CGATCTGCGC CAGGGCGGTC GGACCGTGGC CTTCAAGACC
GGCACCTCCT ATGGCTTCCG CGACGCCTGG GCGGTGGGGT TTGATGGCAA GGTGACGATC
GGCGTTTGGG TTGGCCGCCC CGATGGCACG CCAAGCCCCG GCGCCTTTGG CCGGGCCACC
GCCGCACCCT TGCTGTTCCA GGCCTTTGAA GCGCTTGAAG GTCGGCCGCC GCCGCCGCGG
TCCCGGCCCG ACGGCGTGTT TATCGGCGCC AATGGCGATC TGCCGCCGCC GCTGCGCCGC
TTGGACGGCG AGCCGCCGCG CGCCGGTCGG CGGCTGGCCG TCGACCGCGA CGCCCTGACC
ATCGCCTTTC CCCCCGATGG CTCGGTCCTT GATCCGGCGT CCCTGGTCGA TGGTCTGGCC
CTGTCGGCGC GCGGCGGGCA AAGGCCGCTG ACTTGGCTGG TCGATGGCCG GCCCCTGGTC
AGCCCGGCCT TCGCCCGAAC CGCCCGCTGG ATGCCGCCAA GCCTTCCCCG GGGCGGCGCC
CTGGCGGTCA GGGTGAGCGT GGTTGACGCC GGCGGCCAGG GGGACACGGC CCAGGTGTGG
ATCGGCCAAT CCCCGCCGTA A
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| Protein sequence | MTPPGRRGIG RWLRRLALGG LGLALLVGAG DHLLPPDLGR LTPSTRVMAA NGAVLRAFLT
AEGAWRLPGD PAAVDPFYLA LLQAFEDRRF ASHPGVDPLA VARALGQWLA NGKVISGAST
LTMQTVRLLD PRPERTIAAK LVEMVRAVQL EAHLGKTGVL GAYLTLAPFG GNLEGVRAGS
LAWLGKDPRR LTPGEAALLV ALPQAPEALR PDRHPAAARA ARDKVLERAV RDGLLDPAQA
REAKAEPVPT TRRPMPFSAP HLTERLAAGA PAGAPIATTI DEGLQNRLER LARRVAVPLG
PGQSLALLAA ESASGRILAS VGSPDYLDPE RVGAIDMTRA VRSPGSALKP LLYGMAFERH
IVHPETLMID RPTRFGAYTP ANFGDAHWGE VSVREALAQS LNVPAVMLLD RLGPLAFATR
LQSAGIALRL PKGVERPGLP LALGGLGVRL EDLVGLFAAI DAGGAAPPLR ALAGAPLPAR
RVLEPAAAWQ VADILAGSPP PPGMILADLR QGGRTVAFKT GTSYGFRDAW AVGFDGKVTI
GVWVGRPDGT PSPGAFGRAT AAPLLFQAFE ALEGRPPPPR SRPDGVFIGA NGDLPPPLRR
LDGEPPRAGR RLAVDRDALT IAFPPDGSVL DPASLVDGLA LSARGGQRPL TWLVDGRPLV
SPAFARTARW MPPSLPRGGA LAVRVSVVDA GGQGDTAQVW IGQSPP
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