Gene Rru_A0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0098 
Symbol 
ID3833852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp111737 
End bp112948 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID637824168 
Productcystathionine gamma-synthase 
Protein accessionYP_425190 
Protein GI83591438 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACCCG GTCCTTTCCC CCCCTTGGCC CAGGCCACCC TGGCCCTGCA CGCCGGCACC 
ACCGACGAGT CGGACGGCGC CCAGGTGCTC AATCCCCTGG TTCCGGCCAC CAGCTTTTTC
ACCAAGCCCG AGGCGGTCGG CTTTTCGGCC AATGACATGG CCGAGGACAC GCCGTTTTTG
TATACGCGCT GGAACAATCC GACCAACGCC CTGCTCGAAG AGCGGCTGGC GGCCCTGGAG
GGCGGCGAGG CGGCGGTGGT CTTCGCCAGC GGCATGGCGG CCCTGAGTGG CCTGTTCCTC
TCGCAGCTGA AGGCCGGCGA TCATCTGGTG ATCTCGAGCG TCTGCTACGC CGGCCTCGCC
GAGGTCGCCC ACGATATCCT GCCCGGCCTG GGCATCGCCA CCACCGCCGT CGATACCTCC
AACCTCGAGG CCGTGCGCGC CGCCCTGCGC CCGGAAACCC GGCTGATCCA TATCGAGACT
CCGGGCAATC CGATCCTGCG GCTGTCCGAC ATCGAAGCCC TGGCGGCGAT CGCCCATGCC
CACGGCGCCT TGCTGTCGGT GGATTCGACC ATGGCCACGC CGATCGCCAC CCGGCCGCTT
GCCCTGGGCG CCGATTTCGT CGCCCATTCG CTGACCAAAT ACGCCTGCGG CCATGGCGAC
GCCCTGGGCG GCGCCATCAT CGGCAAGGCC CAGGCGATGG CCGCCTTGCG CAAACACGCC
CTGATCCATT TCGGCGGGGC GATCAGCCCC TTCGCCGCCT GGCTGATTCT GCGCGGCCTG
GAAACCCTGT CGCTGCGCAT GGCCGGCCAT CAGGCCGGGG CGGCGGCGGT GGCGGCTTAT
CTCGAGGGCC ACCCGCGCCT GCGCCGGGTG CTGTGGCCGG GCCTGCCCTC CCATCCCCAG
CACGCCCTGG CGTGCCGCCA GATGAAAAAC TTCTCGGGCA TGGTGTCGTT TTCCGCCGAC
GACGGCCCGG CGCTGGCCCG CCAGTTGGCC GAGCGCCTGC AGGTGATCTC CTATGCGGTA
TCGCTGGGCA AGACGCGCAG CCTGTTGTTC TACATCCCGA CCGAGGCGCT GATCGCCTCG
TCGTTCCACC TCGATGGCGA CGACGCGCGC AGCTACCGCG ACTGGACCGG CGACGGCACC
TTCCGTCTGT CCGTCGGCCT GGAGGACCCC GCCGATCTGA TCGCCGATCT CGAGCGGGCT
TTGGCCCCAT AA
 
Protein sequence
MKPGPFPPLA QATLALHAGT TDESDGAQVL NPLVPATSFF TKPEAVGFSA NDMAEDTPFL 
YTRWNNPTNA LLEERLAALE GGEAAVVFAS GMAALSGLFL SQLKAGDHLV ISSVCYAGLA
EVAHDILPGL GIATTAVDTS NLEAVRAALR PETRLIHIET PGNPILRLSD IEALAAIAHA
HGALLSVDST MATPIATRPL ALGADFVAHS LTKYACGHGD ALGGAIIGKA QAMAALRKHA
LIHFGGAISP FAAWLILRGL ETLSLRMAGH QAGAAAVAAY LEGHPRLRRV LWPGLPSHPQ
HALACRQMKN FSGMVSFSAD DGPALARQLA ERLQVISYAV SLGKTRSLLF YIPTEALIAS
SFHLDGDDAR SYRDWTGDGT FRLSVGLEDP ADLIADLERA LAP