Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0095 |
Symbol | |
ID | 3834288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 109007 |
End bp | 110125 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824165 |
Product | ABC transporter component |
Protein accession | YP_425187 |
Protein GI | 83591435 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0263152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCAC TCGGCATTCG CGGCATCACC AAGCGCTTTG GCGCCACCGA GGTGCTCAAG GGCATCGATC TTGATCTCGA CGACGGCGAA TTCCTGGTTC TTGTCGGGCC CTCGGGCTGT GGCAAATCAA CCCTGCTCAA TATCATCGCC GGCCTGGAAA CCCCCAGCGA GGGCGAGGTG GTGATCGGCG GCGCCGTGGT CAACGACGTG GCGCCGCGCG ACCGCGACAT CGCCATGGTC TTCCAGTCCT ATGCGCTTTA TCCGACGATG ACCGTGCGCG AGAACATCAC CTTCGGCCTG CGCATGCGCG GCGTGGCCAA GCCCGAGCGC GAGCGGGCGG TGGCCAAGGT CGCCACCATG CTGCAGATCG GGCCGCTGCT TGATCGCAAG CCGGGCCAGT TGTCGGGCGG ACAGCGCCAG CGCGTGGCGA TGGGCCGGGC CCTGGTGCGC GATCCGCAGA TTTTTTTGTT CGACGAGCCG CTGTCCAATC TCGATGCCAA GCTGCGCGTC GAGATGCGCC ACGAGATCAA GACCCTGCAC CGCGCCGTGG CGCGGACGAT GGTTTATGTC ACCCACGATC AGGTCGAGGC GATGACCCTG GCCAGCCGCA TCGCCGTGAT GCATCAGGGC GTCATCCAGC ATTATGGCAC CCCGGCCGAG ATTTACGAGC GGCCGGCCAA TCTGTTCGTC GCCGGCTTCA TGGGCGCCCA ATCGATGAAT TTCGCCAAGG GCCTGCTGGT CGGCGACAGC CAGGGCGGCG GCATGGCAGT GCGCCTGGAC GAGGCCAAGG GGCCGCTTGA TCTGCCGCTC GCCCGGCCCG GCAACGGTTG GCGATCGCAC CTTGGCCGGC CGGTGATCCT GGGCTTGCGG CCCGAATACA TCGGGGCGGC CGATCCGGCG GGCCTGCCGC CGGGGCTGGT GGCGGTCGAG CGCCGGGTCG ATATGATCGA GCCGACGGGG GCCGACACCA TGGTGTTCTT CCAGCTTGGC GGCACCCCGG CCTCGGCCCG CGTCGCCCCA CGGGCCATCC CCGGCGTTGG TCCGGGAGCG TTGTCGACCC TGGCCTTCGA TATGACCGCC GCCTCGCTGT TCGACCCGGA CACCGAACGC CGGCTGTGA
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Protein sequence | MASLGIRGIT KRFGATEVLK GIDLDLDDGE FLVLVGPSGC GKSTLLNIIA GLETPSEGEV VIGGAVVNDV APRDRDIAMV FQSYALYPTM TVRENITFGL RMRGVAKPER ERAVAKVATM LQIGPLLDRK PGQLSGGQRQ RVAMGRALVR DPQIFLFDEP LSNLDAKLRV EMRHEIKTLH RAVARTMVYV THDQVEAMTL ASRIAVMHQG VIQHYGTPAE IYERPANLFV AGFMGAQSMN FAKGLLVGDS QGGGMAVRLD EAKGPLDLPL ARPGNGWRSH LGRPVILGLR PEYIGAADPA GLPPGLVAVE RRVDMIEPTG ADTMVFFQLG GTPASARVAP RAIPGVGPGA LSTLAFDMTA ASLFDPDTER RL
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