Gene Rru_A0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0093 
Symbol 
ID3834286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp107196 
End bp108065 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID637824163 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_425185 
Protein GI83591433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACC TTGATCGTCT GATCCCCAAG CTGGTCATCG CCCCGTCGTT CGCCGCCGCC 
TTGCTGTTCG TCTATGGCTT CATCGGCTGG ACGGTTTACA TCTCGTTCAC CAAATCGGGC
ATCCTGCCAC GCTATGAATT GGACGGCGTT GGGCAATACG CCCGGTTGTT CGCCAATCCG
CGCTGGGATG TGGCGGTGAG CAATCTGTTC GTTTTCGGCG GGCTGTTCAT CGCCTTGTGT
TTGGTGATCG GCATCTTGTT GGCGATTCTG ATCGACCAGA AGATCCGCGC CGAGGGCGTG
CTGCGCACCA TCTATCTGTA TCCGATGGCG GTGTCGTTCA TCGTGACCGG CACCGCCTGG
AAATGGATCC TCAACCCCGG CCTGGGCCTT GATAAGGTCA TGCACGGCCT GGGCTGGGAG
GGGTTTTCCT TCGACTGGCT GATCAACCCC GAGAGGGCGA TCTATACGGT GGTCATCGCC
GGGGTCTGGC AGTCGTCGGG CTTCGTCATG GCGCTGTTCC TGGCGGGCCT GCGGTCGTTC
GATCAAGAGG TGATCAAGGC GGCGACCATC GACGGCGCCG GCATGCCGAC CGTCTATTTC
CGCATCATCT TGCCGTCGCT GCATGCGGTG TTCTTGTCGG CGGTGGTGGT GCTGGCCCAT
TTGGCGGTGA AAAGCTTCGA TCTGGTGGTG GCCCTGACCG GTGGCGGGCC GGGCTATGCC
ACCGATATGC CGGCGACCTT CATGTATGCC ATGGCCTTCC AGCGCAGCCA GCTTGGCACG
GCGGCGGCCA GCGCGGTGAT GATGCTGATG ACGGTGATGG CCATCATCGT GCCCTATCTC
TATTCCGAAT TGCGGGAGCG CCGGTCATGA
 
Protein sequence
MRDLDRLIPK LVIAPSFAAA LLFVYGFIGW TVYISFTKSG ILPRYELDGV GQYARLFANP 
RWDVAVSNLF VFGGLFIALC LVIGILLAIL IDQKIRAEGV LRTIYLYPMA VSFIVTGTAW
KWILNPGLGL DKVMHGLGWE GFSFDWLINP ERAIYTVVIA GVWQSSGFVM ALFLAGLRSF
DQEVIKAATI DGAGMPTVYF RIILPSLHAV FLSAVVVLAH LAVKSFDLVV ALTGGGPGYA
TDMPATFMYA MAFQRSQLGT AAASAVMMLM TVMAIIVPYL YSELRERRS