Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0093 |
Symbol | |
ID | 3834286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 107196 |
End bp | 108065 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637824163 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_425185 |
Protein GI | 83591433 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACC TTGATCGTCT GATCCCCAAG CTGGTCATCG CCCCGTCGTT CGCCGCCGCC TTGCTGTTCG TCTATGGCTT CATCGGCTGG ACGGTTTACA TCTCGTTCAC CAAATCGGGC ATCCTGCCAC GCTATGAATT GGACGGCGTT GGGCAATACG CCCGGTTGTT CGCCAATCCG CGCTGGGATG TGGCGGTGAG CAATCTGTTC GTTTTCGGCG GGCTGTTCAT CGCCTTGTGT TTGGTGATCG GCATCTTGTT GGCGATTCTG ATCGACCAGA AGATCCGCGC CGAGGGCGTG CTGCGCACCA TCTATCTGTA TCCGATGGCG GTGTCGTTCA TCGTGACCGG CACCGCCTGG AAATGGATCC TCAACCCCGG CCTGGGCCTT GATAAGGTCA TGCACGGCCT GGGCTGGGAG GGGTTTTCCT TCGACTGGCT GATCAACCCC GAGAGGGCGA TCTATACGGT GGTCATCGCC GGGGTCTGGC AGTCGTCGGG CTTCGTCATG GCGCTGTTCC TGGCGGGCCT GCGGTCGTTC GATCAAGAGG TGATCAAGGC GGCGACCATC GACGGCGCCG GCATGCCGAC CGTCTATTTC CGCATCATCT TGCCGTCGCT GCATGCGGTG TTCTTGTCGG CGGTGGTGGT GCTGGCCCAT TTGGCGGTGA AAAGCTTCGA TCTGGTGGTG GCCCTGACCG GTGGCGGGCC GGGCTATGCC ACCGATATGC CGGCGACCTT CATGTATGCC ATGGCCTTCC AGCGCAGCCA GCTTGGCACG GCGGCGGCCA GCGCGGTGAT GATGCTGATG ACGGTGATGG CCATCATCGT GCCCTATCTC TATTCCGAAT TGCGGGAGCG CCGGTCATGA
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Protein sequence | MRDLDRLIPK LVIAPSFAAA LLFVYGFIGW TVYISFTKSG ILPRYELDGV GQYARLFANP RWDVAVSNLF VFGGLFIALC LVIGILLAIL IDQKIRAEGV LRTIYLYPMA VSFIVTGTAW KWILNPGLGL DKVMHGLGWE GFSFDWLINP ERAIYTVVIA GVWQSSGFVM ALFLAGLRSF DQEVIKAATI DGAGMPTVYF RIILPSLHAV FLSAVVVLAH LAVKSFDLVV ALTGGGPGYA TDMPATFMYA MAFQRSQLGT AAASAVMMLM TVMAIIVPYL YSELRERRS
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