Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0089 |
Symbol | |
ID | 3834282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 102652 |
End bp | 104541 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637824159 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_425181 |
Protein GI | 83591429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0181751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCCCG ACGTTTCCCC TCTCCCATCC CCCGGTTCCC CCCTCCCATC CCCCGGTTCG CCCTGCGCGG ACGCGGTCTC CGCCGATCCC GCCCGCGTGT TGTTGGCTGA TATCTGGGGA TTCAAGGATT TCCGCCCCGG TCAGGAAGCG ATCATCCGCG CCGTGCTGGG CGGCGAGGAC GTGCTGGCGG TCATGCCGAC CGGGTCGGGC AAATCGCTGT GCTACCAACT GCCGGCGCTG ATGCGCCAGG GGGTGACCCT GGTCGTCTCG CCGCTGATCG CCCTGATGCG CGATCAGGTG GCCCAGCTTG ACGCCCTGGG GGTGGCCGCC GGGGCGCTGA ATTCCTCGAT CGACATGGAC GGCTATCGCC GCGTGATGGA TGGGTTGCGC GGCGGCCGTC TCAAGCTGCT CTACGTCGCC CCCGAACGGC TGGCCCGCCC CGATACCCTG TCCCTGCTGC GCGACAGCGG GGTGACGGCC CTAGCCATCG ACGAGGCCCA TTGCGTCAGC CAATGGGGCC ACGACTTCCG CCCCGACTAC CTGTGTCTGG GCAAGGTGCG CGAGGATCTG GGCGGGGTGC AGACGGTGGC CTTCACCGCC ACCGCCGATG CCGCCACCCG CGATGATATC GCCGGACGGC TGTTCCCGGC GCCGCCGCGC CTGTTCATCG GCGGCTTCGA TCGCCCCAAC CTGCGCCTTG CCATGCGGCC CAAGGGCGAC ACCCGGCGGC GGATGTTCGA GTTCGTCGCC GCCCATACGG GCGAAAGCGG CGTGATCTAT TGCGGCAGCC GGGCGCGCAC CGAGGAATTG GCCGAGGGCC TGCGCGGCGC CGGCCACCGG GCCTTGCCCT ATCACGCCGG CCTCGACAAG CCGGTGCGCG ACGCCAATCA GGATGCCTTC CTGGCCGAGG ACGGGCTGGT GATGGTCGCC ACCGTCGCCT TTGGCATGGG CATCGACAAG CCCGATGTCC GCTTCGTCTG CCATGCCGAT ATGCCGCGCT CGATCGAGGC CTATTATCAG GAGATCGGCC GCGCCGGCCG CGATGGTCTG GCCGCCGATA CCCTGACCTT CTATGGCCTG GACGATGTCC GCCTGCACCG CATGCGCATC GAGGAAAGTC AGGCCGGCGA CGAGCAAAAG CGCGTCGAGA TCCAGCGGCT GAACGCCCTG CTGGCGCTGT GCGAAGCGCC GCGCTGCCGG CGCCAGACCC TGCTCGGCTA TTTCGGCGAA CGCACCGAGC CGTGCGGCAA TTGCGATCTA TGCATCAATG GCGTGGAAAG CTTCGACGGC ACCATCGAGG CCCAGAAGGC GATGTCGGCG ATGCTGCGCA CCGGCCAGCG CTTCGCCACC GAGCATCTGA TCAATATCCT GGTCGGCACC CAGACCGACG CCATCACCCA GTACGGTCAC GATAAATTGC CGACCTTCGG CGTGGGCAAG GATCACACGC GCAATGTCTG GCGCTCGATC TTCCGCCAGA TCAGCGCCGG CGGCCTGATC AGCCTGGATA TCGCCAATCA TGGCCGCTGG CTGATGACCG AGGCCGGCCG CGCGGTGCTG CGCGGACAGG CGGGCGTCGC GCTGCGCTCC GATGTGCTCG AAGCCGCCGG CCGCGGCGAG CGCAAGGACA AGGAGCGCCG GGCCAGTGCT CCGGCCGTCC AGCTCGAGGC CGACGATCGC GCCCTGTTCG ACGCCCTGCG CGCCAAGCGC CAGGAGCTGG CGCGGGCCGA AAACGTGCCG GCCTATGTGG TCTTCGCCGA TCGCACCCTG ATCGAACTGG CGACCAAACG CCCGCCCAGC CTTGACGCCA TGCGCGAGAT CCACGGCATC GGCCAAAGCA AGCTCGCCCG CTACGGCGCG GCCTTCCTCG AGGTGATCAC CGCCGGCTGA
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Protein sequence | MVPDVSPLPS PGSPLPSPGS PCADAVSADP ARVLLADIWG FKDFRPGQEA IIRAVLGGED VLAVMPTGSG KSLCYQLPAL MRQGVTLVVS PLIALMRDQV AQLDALGVAA GALNSSIDMD GYRRVMDGLR GGRLKLLYVA PERLARPDTL SLLRDSGVTA LAIDEAHCVS QWGHDFRPDY LCLGKVREDL GGVQTVAFTA TADAATRDDI AGRLFPAPPR LFIGGFDRPN LRLAMRPKGD TRRRMFEFVA AHTGESGVIY CGSRARTEEL AEGLRGAGHR ALPYHAGLDK PVRDANQDAF LAEDGLVMVA TVAFGMGIDK PDVRFVCHAD MPRSIEAYYQ EIGRAGRDGL AADTLTFYGL DDVRLHRMRI EESQAGDEQK RVEIQRLNAL LALCEAPRCR RQTLLGYFGE RTEPCGNCDL CINGVESFDG TIEAQKAMSA MLRTGQRFAT EHLINILVGT QTDAITQYGH DKLPTFGVGK DHTRNVWRSI FRQISAGGLI SLDIANHGRW LMTEAGRAVL RGQAGVALRS DVLEAAGRGE RKDKERRASA PAVQLEADDR ALFDALRAKR QELARAENVP AYVVFADRTL IELATKRPPS LDAMREIHGI GQSKLARYGA AFLEVITAG
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