| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0085 |
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| Symbol | |
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| ID | 3834278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 98274 |
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| End bp | 99635 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637824155 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_425177 |
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| Protein GI | 83591425 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGC TGACCGGCAG CGATGCCGAC ATCGAAATCG AAGAGGCGCC GCCGGGAAAG
ATCCTGATCG TCGAGGATTC GCCCTTCTTT ATGCATGTCC TGCGCCGGCG GATCGGTCAG
GAACTGGGCG TTCCGATCAT CGAGGCCGAA ACCCTGGCCC AGGCCGCCCT GATCATCGAA
GAGGAAGGGT CCAATCTATT CCTCTGCCTG ATCGATCTGG TGCTGCCCGA TGCGCCGAAC
GGCGAGATCG TCGATTATGT GACCGGGAAA GGTCTGGCCG CGGTGGTGTT CACCGGCGCC
TTCAGCGAGG AAATGCGCGA GCATGTCCTG TCTAGCGCCA TTATCGATTA TGTTACCAAG
GATAGTCTGG CCAGCCTGGA CTATCTGGTG GCGATCGTCC GCCGGCTTTG CCGCAACGCC
CACCAGAAAG CCATCGTCGT CGATGACAGC CGTACCGCCC GGGCTTATAT CGGCGATCTG
CTCCGCCTGT ATCGTTTCAA TGTCATCGAG GCGGTCGACG GCGAGGAGGC CCTGGCCCTG
CTGGCGGCGA ACCCCGATAT CCGGCTGATG GTCACCGATT ATTACATGCC CAGAATCGAT
GGCTTCGAAT TGATCAAACG CGTGCGCCAA ACCCATTCGC GCAGCGCTCT GGCGATCATC
GGCGTGTCCA CCGGGGGAAG CGCGCCGCTT TCGGCGCGGT TCATCAAGTA CGGGGCCAAT
GATTTCATCA ACAAGCCCTT TCTGCGCGAG GAATTCTTCT GCCGCATCGC CCAGAACATG
GACACCTTGG ATTATATCGC CGCCCTGGCC CGCTCGGCCC AGATCGATCC GCTGACCGGA
CTGCCCAACC GCCGCTATCT GTTCGATGTC GCCAGCCGCG CCCTGGCCGC GACCTTGCGC
GTCGGCGGTC ATCCGGTGGT GGCGATGATC GATGCCGATC ATTTCAAGGA AATAAACGAT
CGTTTCGGCC ATGATGTCGG CGATCAGGTG CTTGAAGCCC TGGCTCGGGT GATGGACGAT
CATGTCCAGC GGAAGTCCGA TGTCCTTGCC CGTTTCGGCG GCGAGGAGTT TTGCGTGTTC
GTCTCCGACA TGTCGCCCGA ACAGGCCTTC ACCTTTTTCG ATGGCTTGCG CGCTGCTGTC
GCCCAATCGC CGCTGTCGGT TCCCGGACTG GATGATTTGT CGCTGACCAT CAGCATCGGC
GTTTCCACCT GCGCCGCCCC CGACTTGCGT ACGATGATCC ACAGCGCCGA CCGTTTGCTC
TATGACGCCA AGGCGGCGGG GCGTGATTGC ACGGTGGTCG AGGGCTTGGG CGAGCGGACG
CAATCGTGCC GGCAAAGTAG CGGGAAGGAC GAAGACGCGT GA
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| Protein sequence | MDLLTGSDAD IEIEEAPPGK ILIVEDSPFF MHVLRRRIGQ ELGVPIIEAE TLAQAALIIE
EEGSNLFLCL IDLVLPDAPN GEIVDYVTGK GLAAVVFTGA FSEEMREHVL SSAIIDYVTK
DSLASLDYLV AIVRRLCRNA HQKAIVVDDS RTARAYIGDL LRLYRFNVIE AVDGEEALAL
LAANPDIRLM VTDYYMPRID GFELIKRVRQ THSRSALAII GVSTGGSAPL SARFIKYGAN
DFINKPFLRE EFFCRIAQNM DTLDYIAALA RSAQIDPLTG LPNRRYLFDV ASRALAATLR
VGGHPVVAMI DADHFKEIND RFGHDVGDQV LEALARVMDD HVQRKSDVLA RFGGEEFCVF
VSDMSPEQAF TFFDGLRAAV AQSPLSVPGL DDLSLTISIG VSTCAAPDLR TMIHSADRLL
YDAKAAGRDC TVVEGLGERT QSCRQSSGKD EDA
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