| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0065 |
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| Symbol | |
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| ID | 3834107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 75000 |
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| End bp | 75893 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637824135 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_425157 |
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| Protein GI | 83591405 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.114754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCC CGGACACCCC TCCCGATTCC CCTCCGCCGA TCTCCGCCGT CGAGATGCCC
TCGGGCAAGG ATGCGGGCAC CGAGAACTTC CCGGTGGGCT CGGTCCTGTT GCCCGCCCGC
TTGCGTCCCC ATGTCGCCCG CTTCTATGCC TTCGCCCGGG CGATCGACGA CATCGCCGAC
AGCCCCGATC TTGACGCCGC CGCCAAGATC GACCGCCTCC AGGGGTTCGA AGAGGCGATC
ACCGGACGCG ACACCACCGA CCCCGCCTAT GCCAAGGGCC ACGCCCTGCG CGTCAGCCTG
GAAGCCACCG GGGTACCGGC CATCCATGGC GTCGAACTGA TCGCCGCCTT CAAGCAAGAC
GCGGTGAAGG GCCGCTACGC CACCTGGGCC GAGATGATGG ACTATTGCCG GCTGTCGGCC
GCCCCGGTCG GTCGCTATCT GATCGATCTC CACGGCGGGT CGCGGGCGGG CTATGCCTCG
TCCGACGCGC TGTGCGTCGC CCTTCAGGTC ATCAATCACC TTCAGGACTG CCAGGATGAT
TTCCGGGTGC TCGACCGCGT CTATCTGCCC GCCGACTGGC TGGCCGCCGA GGGCGCGTCG
GTAAGCGACC TGGACCGCGC CGCCTGCACA CCGGGCTTGC GCCGGGTGCT CGACCGCTGC
CTGGAGGGAA CGCGCCGGTT GCTTGACGCC GCCCGGCCGC TGCCCGGCGA TATCATCGAC
CGCCGCCTTG GCCTGGAAGC CGCCGTGATC GTTTCCATCG CCCAAACGCT GACCGGGCGC
CTCGCGCGCC AGGATCCGCT GGCGCAGCGG GTGAAGCTGG GCAAGGCGGC GACGGCGTTC
TGCGCCGCCC GCGCCTGTGC TGCCTACCTC ATGGTTCCGG GAGCTTACCG ATGA
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| Protein sequence | MAAPDTPPDS PPPISAVEMP SGKDAGTENF PVGSVLLPAR LRPHVARFYA FARAIDDIAD
SPDLDAAAKI DRLQGFEEAI TGRDTTDPAY AKGHALRVSL EATGVPAIHG VELIAAFKQD
AVKGRYATWA EMMDYCRLSA APVGRYLIDL HGGSRAGYAS SDALCVALQV INHLQDCQDD
FRVLDRVYLP ADWLAAEGAS VSDLDRAACT PGLRRVLDRC LEGTRRLLDA ARPLPGDIID
RRLGLEAAVI VSIAQTLTGR LARQDPLAQR VKLGKAATAF CAARACAAYL MVPGAYR
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