| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0059 |
|---|
| Symbol | |
|---|
| ID | 3834101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 66362 |
|---|
| End bp | 67372 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637824129 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_425151 |
|---|
| Protein GI | 83591399 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.174791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACCCG AGCGTCCAGA CGAAGGAACC AGCGACGTGA GCGACGAGAA GCCCATCCGC
GTCATCCTGG CCAATCCACG CGGTTTTTGT GCCGGTGTCA CCCGGGCCAT CGAGATCGTC
GATAAGTGCC TGGAGCTTTA CGGGCCGCCG GTCTATGTCC GCCACGAGAT CGTCCACAAC
AAGCATGTGG TCGACAGCCT GCGGGCGCGC GGCGCGGTTT TCGTCGACGA GCTCGATGAA
GTGCCCCATG GCGCGGTCAC CGTGTTCAGC GCCCACGGCG TGTCCAAGGC GGTGATCAAC
GACGCCAAGC AGCGCCAGTT GCCGGTGGTC GACGCCACCT GTCCGCTGGT GTCGAAGGTC
CATAAGGAAG GCCAGAACCA CGCCGCGCGC GGCCGCGAGG TCGTTCTGAT CGGCCATGCC
GGCCATCCCG AGGTCGAGGG CACCCAGGGC CAGATCCCCG GCGGCGTCTA TCTGGTGAGC
GCCGCTTCCG ATGTGGATGG CTTGGTGGTG CGCGATCCCG AGAATCTGGC CTATGTCACC
CAGACCACGC TGTCGGTCGA CGATACCCGC GAAGTGATCG AAGCCCTGAA GCTGCGCTTT
CCCGCCATCG TCGGTCCCGA TGTCAAAGAC ATCTGCTATG CCACCCAGAA CCGCCAGTCG
GCGGTGCGCG AGATCGCCCG CGAGGCCGAT CTGCTGCTGG TCGTCGGCTC GCGCAATTCC
TCCAATTCCA ACCGGCTGCG CGAGATCGGC GCCGAAATGG GCAAGCCGTC GTTCCTGATC
GCCGATGCCG AAGCCCTGCG CCCGGAATGG ATGGAGGGCG TGGCCACCGT CGCCGTCACC
GCCGGCGCCT CGGCCCCCGA GGCCCTGGTT CAGGGGTTGA TCGACCGCTT GGGGGACTTC
GGCCGGGTCG AGGTGATCGA ACAGGCCGGG GTGGAGGAAC ACACCCAGTT CAAGCTGCCC
CGCATCCTGC AGGACGGCGA ACGCATAAAG GCCGACGAAA GCGTCGCCTA G
|
|---|
| Protein sequence | MQPERPDEGT SDVSDEKPIR VILANPRGFC AGVTRAIEIV DKCLELYGPP VYVRHEIVHN
KHVVDSLRAR GAVFVDELDE VPHGAVTVFS AHGVSKAVIN DAKQRQLPVV DATCPLVSKV
HKEGQNHAAR GREVVLIGHA GHPEVEGTQG QIPGGVYLVS AASDVDGLVV RDPENLAYVT
QTTLSVDDTR EVIEALKLRF PAIVGPDVKD ICYATQNRQS AVREIAREAD LLLVVGSRNS
SNSNRLREIG AEMGKPSFLI ADAEALRPEW MEGVATVAVT AGASAPEALV QGLIDRLGDF
GRVEVIEQAG VEEHTQFKLP RILQDGERIK ADESVA
|
|---|
| |