Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0058 |
Symbol | |
ID | 3834100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 64954 |
End bp | 65955 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824128 |
Product | dihydrokaempferol 4-reductase |
Protein accession | YP_425150 |
Protein GI | 83591398 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTCC TCGTGACCGG AGCATCGGGT TTCGTCGGCG CCGCCGTCGT GCGCGCCCTT CTCGCCCGGG GGCAAAACGT GCGCGCCCTG GTGCGCGACA CCTCGCCCAG GCGTAACCTT GAAGGACTGC CCCTTGAAAC GGTGATCGGC GATCTGACCG ACACGGCCTC GCTGAGGGCC GCCGCCCGCG GGGTGGACGC GCTGTACCAC GTCGCCGCCG ACTACCGGCT GTGGACGCTT GACCCTCCGG CGATGTTTCG CGCCAATGTC GAGGGCTCGG TCGCCGTCAT CCGCGCCGCC GCCGAGGCCG GGGCGAAACG CATCGTCTAT ACCAGCAGCG TCGCCGTGAT CAAACCCAAG GCCGATGGCA CCCCGGCCGA TGAGACCACG CCCACCCTGG CCTCCGACAT GATCGGCCCT TATAAGCTGT CGAAGTTCGA GGCCGAGCGG GCGGTGCAGC GGCTGATCAC CAACGAAGGC GCGCCGGTGG TCATCGTCAA TCCCTCGACG CCGATCGGTC CGCGCGACAT AAAACCGACA CCGACCGGGC GGATGATCGT CGAAGCGGCG CTGGGCAAGA TGCCGGCCTA TGTCGATACC GGCCTCAACG TCGCCCATGT CGAGGACGTG GCGGAAGGCC ATCTGCTGGC TTTTGATCGC GGAGAGATCG GCGAACGCTA TATTCTGGGC GGCGAGGACA TGAGCCTGCG CGACATCTTG TTCACCATCG CCCGGCTGAC CGGCGGCAAG CCCCCCCGGG TCAGCCTGCC CCACGGGCTG ATCGTACCCT TGGCCTGGGC GGTGGAAACC CTGGCCCGGC TGCGGCGCTC CGAGACCGAG CCTTTCGTCA CCCTTGATGG CCTGCGCATG GCGCGCAAGC ACATGTTCTT CTCGTCGGCC AAGGCCAGAA CGGCGCTTGG TTATGCCCCG CGACCGGCCG AACAGGCCCT GGCCGACGCC CTCGTCTGGT TCCGCGCCAA TGGCTTTCTC GATCCCCGTT GA
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Protein sequence | MTVLVTGASG FVGAAVVRAL LARGQNVRAL VRDTSPRRNL EGLPLETVIG DLTDTASLRA AARGVDALYH VAADYRLWTL DPPAMFRANV EGSVAVIRAA AEAGAKRIVY TSSVAVIKPK ADGTPADETT PTLASDMIGP YKLSKFEAER AVQRLITNEG APVVIVNPST PIGPRDIKPT PTGRMIVEAA LGKMPAYVDT GLNVAHVEDV AEGHLLAFDR GEIGERYILG GEDMSLRDIL FTIARLTGGK PPRVSLPHGL IVPLAWAVET LARLRRSETE PFVTLDGLRM ARKHMFFSSA KARTALGYAP RPAEQALADA LVWFRANGFL DPR
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