| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0039 |
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| Symbol | |
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| ID | 3834369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 42142 |
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| End bp | 42810 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824109 |
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| Product | cytochrome c-type biogenesis protein CcmB |
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| Protein accession | YP_425131 |
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| Protein GI | 83591379 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.46619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAG TCTTTTTGTC GGTTCTGACC CGCGAACTGC GTCTGGCCCT GCGCCAGGGC
GGCGACAGCC TGATGGTGGT GGCCTTTTTC GTCGTCACCG TGGTGCTGTT TCCCTTTGGC
GTCGGCCCCG AACCGGCGGT GCTTGAACGC ATCAGCGCCG GGGTGCTGTG GGTCACCGCC
CTGCTCGCCT CGATGCTGTC GCTCGACCGC CTGTTCCAGC AGGATTACGA GGATGGCAGC
CTTGACCTGC TGGTGCGCTC CTCGGCGCCG TTGAGCGCCG TCGTCATCGC CAAGGTCGCC
GCCCATTGGC TGACCTCGGC CCTGCCGCTG ATCGCCGCGG CGCCCCTGCT CGCCGTCTTG
CTGCAGATGC GCGGCGATGG CTTCGCCGTG CTGATGGCGG CGATGGCGCT CGGCACCCCC
AGCCTCAGCC TGATCGGCGC CGTGGGGGCC GCCCTGGTGC TCGGCGCCCG GCGCGGCGGG
GTTCTGGTGT CGTTGCTGAT CCTGCCGCTG TCGGTGCCGA TTCTGATCTT CGGCGTTTCG
GCCGTCGACG CGGCGGTGAT GGGATTATCC TATGCCGCCC AACTCAAGGT CCTGGCGGCG
ATTTTGCTTG TCACCCTGGC GCTTTGCCCC TTCGCCACGG CGCTCGCCTT GCGTCAGGCG
GTGGAATGA
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| Protein sequence | MSGVFLSVLT RELRLALRQG GDSLMVVAFF VVTVVLFPFG VGPEPAVLER ISAGVLWVTA
LLASMLSLDR LFQQDYEDGS LDLLVRSSAP LSAVVIAKVA AHWLTSALPL IAAAPLLAVL
LQMRGDGFAV LMAAMALGTP SLSLIGAVGA ALVLGARRGG VLVSLLILPL SVPILIFGVS
AVDAAVMGLS YAAQLKVLAA ILLVTLALCP FATALALRQA VE
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