Gene Rru_A0035 details

Gene Information

• Locus tag: Rru_A0035
• ID: 3834136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 38390
• End bp: 40405
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637824105
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_425127
• Protein GI: 83591375
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.836519
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCG AGCTTGGACA TTTCTGCCTC GTGCTCGCCC TGTTCGTCGC CCTCGTCCAG 
GCGGTGGTGC CGATGGTTGG GGCGCAGCGC GGCAATCTGG CGTGGATGGA CTTGGCGCGC 
AGCGGCTCGG TCGCCCTGTT CGGCCTGATC GTTCTGGCCT TCGCCGCCCT GACCTATTGC 
TATGTCGTCA GCGACTTCTC GGTGATGAAC GTCTTCGAGA ACAGCCATAG CGACAAGCCG 
ATGCTCTATA AGGTCTCGGG CGTCTGGGGC AATCACGAGG GGTCGCTGCT GCTGTGGATC 
CTGATCCTGT CGGGCTTCAG TCTGGCGGTC AGTCTGGTCG GCGGCAATCT GCCCCCCGCC 
CTGCGGGCCC GCACCCTGTC GGTCCAGGCG ATGATCACCT GCGGCTTTTT GCTGTTCATC 
TTGTTCACCT CCAATCCCTT CGCCCGGGTG CCCGGCCTCG AGGTTCCCTT GAATGGCCGC 
GGCCTTAACC CGCTGCTCCA GGATCCCGGC CTCGCCTTCC ATCCGCCCAT GCTCTATGCC 
GGCTATGTCG GCTTCTCGAT GGCCTTCTCC TTCGCCATCG CCGCCCTGAT CGAGGGCAAG 
GTCGATGCCG CCTGGGCCCG CTGGGTCCGC CCGTGGACGC TGGTGGCCTG GGTCTTCCTG 
ACCTTCGGCA TCGCCCTGGG CAGTTGGTGG GCCTATTACG AACTGGGCTG GGGCGGCTGG 
TGGTTCTGGG ACCCGGTCGA GAACGCCAGC TTCATCCCCT GGCTATCGGG CACGGCGCTG 
CTGCATTCGG CCGTCGTCGT CGAGAAGCGC GACGCCTTGA AATCCTGGAC GATCCTGCTG 
GCGATCGTCA CCTTCTCGCT GTCGCTGCTT GGCACTTTCC TGGTGCGTTC GGGCGTCATC 
ACCTCGGTTC ACGCCTTTGC CACCGATCCC ACGCGCGGCC TGTTCATTCT GGGGCTGCTG 
CTGGTCGCCA TCGGCGGATC CTTCACCCTT TACGCCGTGC GCGCCCCGGC GCTGAAGGGC 
GGCGGGCTGT TCGCGCCGAT TTCGCGCGAA GGCGGGCTGT TGATCAATAA TCTGCTGATG 
AGCACGGCCT CGGCCACGGT GCTGCTCGGC ACGCTGTATC CGCTGATCGC CGACGCCCTC 
GATTTGGGCA AGGTCACGGT GGGCGCGCCG TTCTTCAACC GGGTCTTCCT GCCGCTGATG 
GTGCCCTTGC TGGTGCTGAT GGCGATCGGC CCGCTGCTGT CGTGGAAGCG CGCCGATCTG 
CGTGGGGCGC TCGGCCGGCT GAAGGGCGCG CTGATCGTCG CGGCGCTGGT TTTCGCCGGC 
ACCTTCCTGG CGACCGGGGG CGGTCTGGCC CAGGTCGGCG CCGCCGCCGG CATGACCCTG 
GCCGCCTGGG TGCTGGTCGG CACCCTGGTC GAACTGGCCG ATCGGATCCG CTTTTTGCGC 
ATTCCCTTAG CCGATTCGCT GCGCCGCCTC GTCGGTCTGC CGCGATCGAC CTGGGGCATG 
GTTCTGGCCC ATGGCGGCAT GGGGCTGGTG GTGATCGGCG TCGTTGGCAA TACGGCCTGG 
AAGGCCGAAA GCATCCAGAC CCTGCGCCCG GGCGAAAGCC GCGAGCTGGC CGGCCATACC 
TTCACCCTGC AAGGCGCCGC CCCGATCCAG GGCCCCAATT ACGAGGCGCT GCGCGGCGAT 
ATCCTCCTGT CGCGCGAGGG CGAGACCCTG GCCCGCTTGG CTCCCGAGAA GCGGCTTTAC 
ACCACCCCGC CGATGCCGAC CACCGAGGCC GGGATCCACA GCAACGGCCT GTCGGACTAT 
TACGCGGTGA TCGGCGATCC CACCGACAAC GGCGGCTTCG TCACCCGCTT CTATTACGAG 
CCGGCGGTGC CTTTCTTGTG GTATGGCGCC TTGTTCATGG GCCTGGGCGG ACTGGTCTCG 
CTGTCGGATC GCCGCCACCG GGTGGGGGCG CCAACGGCGC GCCGCGTCTC CCCGGCCAAG 
ACCGCCAGCC CCCCCGCCCC CGCCCCGGCG GAATAA 

 

Protein sequence

MIAELGHFCL VLALFVALVQ AVVPMVGAQR GNLAWMDLAR SGSVALFGLI VLAFAALTYC 
YVVSDFSVMN VFENSHSDKP MLYKVSGVWG NHEGSLLLWI LILSGFSLAV SLVGGNLPPA 
LRARTLSVQA MITCGFLLFI LFTSNPFARV PGLEVPLNGR GLNPLLQDPG LAFHPPMLYA 
GYVGFSMAFS FAIAALIEGK VDAAWARWVR PWTLVAWVFL TFGIALGSWW AYYELGWGGW 
WFWDPVENAS FIPWLSGTAL LHSAVVVEKR DALKSWTILL AIVTFSLSLL GTFLVRSGVI 
TSVHAFATDP TRGLFILGLL LVAIGGSFTL YAVRAPALKG GGLFAPISRE GGLLINNLLM 
STASATVLLG TLYPLIADAL DLGKVTVGAP FFNRVFLPLM VPLLVLMAIG PLLSWKRADL 
RGALGRLKGA LIVAALVFAG TFLATGGGLA QVGAAAGMTL AAWVLVGTLV ELADRIRFLR 
IPLADSLRRL VGLPRSTWGM VLAHGGMGLV VIGVVGNTAW KAESIQTLRP GESRELAGHT 
FTLQGAAPIQ GPNYEALRGD ILLSREGETL ARLAPEKRLY TTPPMPTTEA GIHSNGLSDY 
YAVIGDPTDN GGFVTRFYYE PAVPFLWYGA LFMGLGGLVS LSDRRHRVGA PTARRVSPAK 
TASPPAPAPA E