Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0033 |
Symbol | |
ID | 3834134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 37268 |
End bp | 37780 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637824103 |
Product | cytochrome C biogenesis protein |
Protein accession | YP_425125 |
Protein GI | 83591373 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00807478 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTC GCCTGTTCGC CATCGCCGCC CTGGCTTGGC TTCTCGCCCC GGGAGCGGCC CTGGCCGTGC TGCCCGACGA ACAGCTTGCC GACCCCGCCC TGGAAGGCCG GGCGCGGACG CTGAGCCAGG GGCTACGCTG CGTTGTCTGC CAAAGCGAGA ACATCGACGA ATCGAACGCC GAACTGGCCC GCGACATGCG CATCCGTCTG CGCGAATTGC TGGTGGCGGG CAAAAGCGAT GACGAGGCGG TGGGCTATAT GGTCGAGCGG TATGGCGATT ACGTGCTGAT GAAGCCGCCC TTCAAGGCGA CCACCCTGGC GCTGTGGCTG GGCCCTTTCG CCCTGCTGCT GGTCGGCGCC CTGGGGATCG GCCTTTATTA CCGCCGTCGC GGACCGATAG GCGCCGAAAG CGCCCCCGCC GCCCTGTCGG CCGCCGAGCG CCAGAGGCTT GATCACCTGC TGGCCGACGA CGAACCGCCC ACCCCGCCCG GCGACCGGGA GGCCGGCCGA TGA
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Protein sequence | MIRRLFAIAA LAWLLAPGAA LAVLPDEQLA DPALEGRART LSQGLRCVVC QSENIDESNA ELARDMRIRL RELLVAGKSD DEAVGYMVER YGDYVLMKPP FKATTLALWL GPFALLLVGA LGIGLYYRRR GPIGAESAPA ALSAAERQRL DHLLADDEPP TPPGDREAGR
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