Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0031 |
Symbol | |
ID | 3834132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 34821 |
End bp | 35720 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637824101 |
Product | LysR family transcriptional regulator |
Protein accession | YP_425123 |
Protein GI | 83591371 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.213809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCGCA AGATTCCCAG CAATTCTGCA CTCATGGCCT TCGAGGCGTC GGCGCGTCAT GGGAGCTTTG CTCGCGCGGC TGACGAACTG GGCCTGACCG AAGGGGCGAT CAGCCGCCAG ATAGGCCGGC TGGAAGCTTT CCTCGGCGTC ACGCTGTTCG CGCGGGTTGG TAATCGTGTC CGGCTTTTGC CAAATGGCGA GCGTTATGCG GCTCAGGTGC GCGAGTCACT CGACCGACTG GAGCGTGATA GTCGCTATCT GATGGGGCAA CCCAGCGATG GCGCGAGCCT CGACATCGCC ACCATCCCGA CCTTCGCCGC CCGCTGGCTC ATTCCCCGCT TGGCACGGTT CAGGCAAGAG CACCCGAACA TCATCGTGCA TCTTGCCGAA CGGATGGAGC CCTTTGTGCT TGCCGGAAGC GGTTTCGATG CCGCGATCCA TTTCGAGCAT CCTGCTTGGA CGGGAATGGG AACGCACCGT CTGTTGCATG AGACCTTGGT TCCGGTTTGC CATCCGGCGC TTCTCGGGGG AGGGGAAGGA GCGGTATCCT TGGATGAATT GCCGCGCCTT CATCGACGTC AGAACCCGGA TGCTTGGCAA CGCTACGCCC AGGAAACCGG ACTCGTTCTG ACCAATCCTG CGATCGGTCC CCGTTATGAT CTTCACATTA TGCTGATCGA GGCCGCGCTC GCGGGACTTG GCGTCGCCCT GGTGCCGCGC CTCTATATCG AAACCGAGTT GGCGGAAGGC CGATTGATCG CGCCTTGGCC TGATGGTCAG TCGATCTCCA AGACCTTCTG CCTCATCCTG CCCGAGCCGA TCGGATTGAG TGACGGTCCG CTACAGGTTT TTGCAAAGTG GCTTCTCAAG GAAGCGCGAT CTGCAAATCC AACGCCTTGA
|
Protein sequence | MRRKIPSNSA LMAFEASARH GSFARAADEL GLTEGAISRQ IGRLEAFLGV TLFARVGNRV RLLPNGERYA AQVRESLDRL ERDSRYLMGQ PSDGASLDIA TIPTFAARWL IPRLARFRQE HPNIIVHLAE RMEPFVLAGS GFDAAIHFEH PAWTGMGTHR LLHETLVPVC HPALLGGGEG AVSLDELPRL HRRQNPDAWQ RYAQETGLVL TNPAIGPRYD LHIMLIEAAL AGLGVALVPR LYIETELAEG RLIAPWPDGQ SISKTFCLIL PEPIGLSDGP LQVFAKWLLK EARSANPTP
|
| |