Gene Rru_A0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0015 
Symbol 
ID3833902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp16232 
End bp16852 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID637824084 
Product3'-5' exonuclease 
Protein accessionYP_425107 
Protein GI83591355 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCG CACCGACCAT CCATTACCAC CGCGGCGACC TGCCCAGCGG TCTGACCTTC 
CCCCAGGGCA TCGCCGTCGA TACCGAGACC ATGGGGCTGA ACCCCCATCG CGATCGCCTG 
TGCGTCGTCC AGCTTTCGGG CGGCGACAAC ATCGCCCATG TCGTCCATCT GAACCGCGAC 
CTGCAGGCCC CGGTGCTGGC GTCGTTGCTT GGCGATCCCT CGGTGCTGAA GATCATGCAT 
TTCGGCCGCT TCGACATCGC CTCGATCCAC CACGGCCTGG GCGTGCTGTG CGAGCCGGTC 
TATTGCACGA AGATCGCCAG CAAGCTGTGC CGCACCAATA CGGATAGCCA CGGGCTGAAG 
GCCTTGTGCA AGGACCTGCT GGGCGTCGAT CTGTCCAAGC ATCAGCAAAC CAGCGACTGG 
GGCGCCGAAA GCCTGAGCCC CGAGCAGTTG ACCTATGCCG CCAGCGATGT CTTGTACCTG 
CACGCGCTGA AGGCCCGCCT GGATGGCCTG CTCGCCCGCG AAGGCCGCAC GACCCTGGCC 
GAAGGCTGCT TCCGCTTCCT GCCCACCCGC GCCCTGCTCG ATCTGGCCGG CTGGGAAGAG 
CCCGATATCT TCAGTCATTG A
 
Protein sequence
MTIAPTIHYH RGDLPSGLTF PQGIAVDTET MGLNPHRDRL CVVQLSGGDN IAHVVHLNRD 
LQAPVLASLL GDPSVLKIMH FGRFDIASIH HGLGVLCEPV YCTKIASKLC RTNTDSHGLK 
ALCKDLLGVD LSKHQQTSDW GAESLSPEQL TYAASDVLYL HALKARLDGL LAREGRTTLA 
EGCFRFLPTR ALLDLAGWEE PDIFSH