Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0009 |
Symbol | |
ID | 3833896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 9673 |
End bp | 10137 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637824078 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_425101 |
Protein GI | 83591349 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.963845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTA CCGACCTCAT TACGCCTGAC AGCATCATCG CCAATCTGCG CGTGTCCAGC AAAAAGCAGG CCCTGCAGGA ACTGGCGAAG CGTGCTGCCG AGCTTACCGG ACAGCACGAG CGCGCTATTT TCGACGTGCT GCTGGAACGG GAAAGGCTGG GAACCACGGG CGTGGGCAAT GGCATCGCCA TACCCCATGG CAAATTGGCC AGTCTTTCGG GGTTACACGG CCTGTTCGCC CGTCTCGAGG AGCCGATCGA CTTCGATTCC ATCGATGATC AGCCCGTGGA TCTGGTGTTC TTGCTGCTCG CCCCGGAAGC GGCGGGGGCT GATCACCTGA AGGCCTTGGC CCGGGTTTCC CGGTTGCTGC GCGACCGTTC GATTTGCGAG AAGCTGCGCG GCACCAGCGA CCCGGAGGCG CTCTATACGC TTCTGGCCCA TTCCCAGGCC TCCCAGGCGG CCTGA
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Protein sequence | MEITDLITPD SIIANLRVSS KKQALQELAK RAAELTGQHE RAIFDVLLER ERLGTTGVGN GIAIPHGKLA SLSGLHGLFA RLEEPIDFDS IDDQPVDLVF LLLAPEAAGA DHLKALARVS RLLRDRSICE KLRGTSDPEA LYTLLAHSQA SQAA
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