| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0003 |
|---|
| Symbol | recF |
|---|
| ID | 3833890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3170 |
|---|
| End bp | 4297 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637824072 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_425095 |
|---|
| Protein GI | 83591343 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGAGC GGCTGACCCT GACCGCCTTT CGCTGCTACG ACCGGCTGCG CCTGGATGTC
GGACCCCGGC CCCTGGTGCT GACCGGTCCC AATGGCGCGG GCAAGACCAA TCTGCTGGAA
GCCCTGTCGT TTCTCGCCCC GGGGCGCGGC TTGCGACGGG CGGCTCTGGC CGATCCCTGC
CGCCGGGTCG GGGGCGACGC CGCGACGGCG GGCCCGCCCT GGGCGGTGGC CGCCCATCTG
CGGTTGCCGG CGGGGCCGGG AACCCTGGGG CGCGGCGTCG ATGTCGGCAC CGGCCTTGAG
CGGGCGACGG CGGGCGAGCG CCGTCTGGTG CGCATCGATG GGGCGACGGC CGGTCAGGCG
GCGCTGGGCG ATCTGTTCTC GGTGCTGTGG CTGACCCCGG AAATGGACGG GTTGTTTCGC
GGCGGGGCGA GCGAGCGCCG GCGCTTTCTT GACCGTCTGG TCAATGGCCT TGATCCCGAT
CACGCCGGAC GCACCGCCGC TTACGCCCAG GCCCAGCGCG AACGCGCCCG CCTGCTGCGC
GAGGGACGGG CGTCGCGCGG CTGGCTGGAC GGGCTGGAAG ACGTGATGGC CCGCCATGGC
GTGGCGATCG TCGCGGCGCG CCGCGATCTG GTCGACCGCC TGGGGGCGGC GGTGCGCGCC
GCCACCGGGC CGTTTCCCGG GGCGCGGATC GATCTGGTCT CCGAGGTCGA CGGCTGGCTG
GCCGCCGGCC CGGCCCTGGC CGCCGAAGAC CGCCTGCGCG CCGCCCTGGC CATGGCGCGC
GGACCCGAGG CGCCGGCCCC GGGACCGCAC CGCGATGATC TGGCGGTGCG CCACGGCCCC
AAGGACATTC CCGCCGTCCA GGCCTCGACC GGCGAGCAGA AGGCGGTGCT GATCGCCCTG
ATCCTGGCCC AGGCCCGGGT CCAGGAGGCC GCCCGCGCCG TGGCGCCGCT GCTGTTGCTC
GACGAGGGCG TGGCCCATCT CGATGCGCCG CGCCGCGCCG CCCTGGGCGA GGCCCTGAGC
GGCCAGGGAC TTCAGGCCTG GGTCTCGGGA ACGGAGGCGC AAGCTTTTGA CTCCTGGGCC
AAAAACGCTC AATTCCTGCG CATCGCCGAG GGGGCCGTGC TAGACTAG
|
|---|
| Protein sequence | MVERLTLTAF RCYDRLRLDV GPRPLVLTGP NGAGKTNLLE ALSFLAPGRG LRRAALADPC
RRVGGDAATA GPPWAVAAHL RLPAGPGTLG RGVDVGTGLE RATAGERRLV RIDGATAGQA
ALGDLFSVLW LTPEMDGLFR GGASERRRFL DRLVNGLDPD HAGRTAAYAQ AQRERARLLR
EGRASRGWLD GLEDVMARHG VAIVAARRDL VDRLGAAVRA ATGPFPGARI DLVSEVDGWL
AAGPALAAED RLRAALAMAR GPEAPAPGPH RDDLAVRHGP KDIPAVQAST GEQKAVLIAL
ILAQARVQEA ARAVAPLLLL DEGVAHLDAP RRAALGEALS GQGLQAWVSG TEAQAFDSWA
KNAQFLRIAE GAVLD
|
|---|
| |