Gene Rru_B0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_B0037 
Symbol 
ID3833368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007641 
Strand
Start bp35373 
End bp37865 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content60% 
IMG OID637824056 
Producthemolysin-type calcium-binding region 
Protein accessionYP_425073 
Protein GI83582767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.475959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCG CTTTTAACGC CACCTACTAC CTGACGGCCT ATCCGGACGT CGCCAAGGCG 
GTGTCGCTGG GCCAGTTCGC CAGCGCCGAG GCCCATTACA ACCTGTTCGG CGCCAAGGAA
CTGCGCAACC CCAACAGCTA TTTCGACGCC AACTACTACG CCGCCCAGAA CCCCGACGTT
CTGAACGCCG TGTCCAATGG CGCCTTCCCC AGCGTTTGGG CCCACTTCCT CGCCTACGGC
GCCGCCGAAG AGCGCGCCCC CTCGACCGCC CTCGCTGCTT TCAACGAGAC CAGCTATCTG
GCCGCCAACC CTGACGTCGC CGCCGCCGTG ACCGCCGGCA GCATGCCGTC GGCCCTCTAC
CACTTCCTGG CTTTCGGCGT CGACGAAGGC CGTAGCGGCT CGGGCGTGAC CATTGGCGAG
AACGTGGGCC AGACTTACAC CCTTACGACG GGTGTGGATG CTCTGACCGG CACCGCCAAT
AACGACACAT TCAATGGCTA TGTGAACGTC ACTGCGAACT CTACTAACAG CACCTTTACT
GCTTCTGATT CGATCGACGG CGGTGCCGGC AAGGACAGCC TGCATATCAC GGTCGAAGGG
AATGCCGCTG GATCGCTTCC CGCCGCGACC ATCACTTCGG TTGAAAATTT CTTCGTCCGT
GAAGTTGGCG GTACGGCTGG TTCCTACGAT TTTGGCACGG TTCTCGGTGA GGAGCAGGTT
TGGTCGGATC GTTCGACCGA CGCCGTTACC TTCGCCAACC TTGCCGCCGG AACGACTGTC
GGCCTCAAGG GCGACGGCGC AACGGTTCTT GGCAATGTGA CCTTCGAGCA GGTGACGGCT
GCCGCGGCTG TCAACATTGC GATCGATGGC GTAGGCACGA CCGGTGCGCC GACGATCACC
AATGGCGTTG CCGCCAATGC GATCACCACC AACCCGACTG TAGCCACCAT CACCTCGACG
GGTGTTGCGA ACACGGTTGG TGCTATTGAT CTGACGGAGA CCGCTGGCTC TGCTACGGCC
GGTATCGCCA CGCTCAACAT CAATGCGGAG ACCAATCTGA CCGCCACGCT CGTGGCGGCT
GATTTCAACA CCACCGGGGC CGCTCTGAAG GTTGCTGGGC TTGCTTCGAG CGTTGATGTT
GGCTCGTTGG GTGTGTTCAA GACCATTGAT GCAAGCGGTC TGACTGCCGG CGGTGTGACC
GTTGGCCTCA ACGCTGTGAC GACCAGCTTC GCGGGTGGCG CGGGCAACGA TGTCGTTACT
ACGGCGGCTC TTGCTGCGAC GGTTGCTGCC TCGGCGATCA ATGCGGGTGC TGGTACTGCG
GATCGCCTTG TGGTGAATGC TACCACTGAT GTGGATACTG CTGCTGAGGC CCAGCACTAC
GCTGGCTTCG AGGTTCTGCA GGTCGGGGCT GGCGTCACGG CGGATGCGAG CCTTTTCACC
AACTCCGCCA TCAACGCTGT CCGCTTTACG GGCTCGGGTA CCATCAATGG TCTGAATGCC
ACACAGGCCG CTAACGTGAC GGTGACCGCT AACGCGACCC CGGTGATTGG CATTACGGGG
GCATCCGACG TTGGTCAGAT TGACACCGTA AAGATCACGG CTGACGATGG TGCCGCCGCC
GTCAGCACTA TCACACTCGC CAACGTTAAT GCGGCTGGTG TTGAGAACCT TCAGTTCGTT
GCCACTGACG CGATTACCGT TAGCTCTCTG ACAAGTTCTG CGGCCGTGAC CGGCATCACC
GTCACCGGGG CGCACGATGT CTCGATCACG ACCGGGGCGC TTGGTGTAAA CGTGAACACG
GCCATTGATG CTTCGGCCTT GACTGGTGCG TTCACGCTTG ATGCTTCGGC GGCAACTGGG
GCAAATGGCT TGTCTGTTAC CAGCGGAACT GGCAACGACA CCATCACCGG AACGGCCAAC
GCTGATATCA TCCGGGTTGG TGCGGGCAAC GATACGGTCA CTGCGGGTGC GGGAATCGAT
AGGATCGATC TCGGCGCTGG CAATGACACG GTCGTCTTCG GCGAAGCCTT CGCGGCTGGC
AACGCCAACC ACGATGTCGT CACTGGGTTC ACTTTCGGCG CTGCGTCGGA GGACAAGTAC
GACATCGGCT TTACCGTTGC GAACGGTACG ACCAACGCGA CTGCTAACCT TGCCGCGCTT
GCGCCGGTGG CTGTTGCCGA CAACGGTTCG GCTTCCGCCA ATGACGTGAT CTTCACGTTC
AGCGGTGCTA ATGATAAGCT CGCCGCGAAT ACGACCGCGA CTACCGCTGT CGCTAATGCA
GTGACCGCCC TGACCAGCGG TGGTGATTTC GCTGCGTCGA ATGTTACTGC CGGTGATAGC
CTTGTGCTTG TGCTGGATAA TGGAACCGAC TCGTTCATCT TCCATTATGT CGCTGATGCG
ACTCCGGCTA CGACGTCGGC TGCCGATCTT GAGTTGATCG GAGTGGTTAC GGGGCAGCTT
GCCAGCCAGG TTGTCACGGG CGACTTCATC TAA
 
Protein sequence
MSLAFNATYY LTAYPDVAKA VSLGQFASAE AHYNLFGAKE LRNPNSYFDA NYYAAQNPDV 
LNAVSNGAFP SVWAHFLAYG AAEERAPSTA LAAFNETSYL AANPDVAAAV TAGSMPSALY
HFLAFGVDEG RSGSGVTIGE NVGQTYTLTT GVDALTGTAN NDTFNGYVNV TANSTNSTFT
ASDSIDGGAG KDSLHITVEG NAAGSLPAAT ITSVENFFVR EVGGTAGSYD FGTVLGEEQV
WSDRSTDAVT FANLAAGTTV GLKGDGATVL GNVTFEQVTA AAAVNIAIDG VGTTGAPTIT
NGVAANAITT NPTVATITST GVANTVGAID LTETAGSATA GIATLNINAE TNLTATLVAA
DFNTTGAALK VAGLASSVDV GSLGVFKTID ASGLTAGGVT VGLNAVTTSF AGGAGNDVVT
TAALAATVAA SAINAGAGTA DRLVVNATTD VDTAAEAQHY AGFEVLQVGA GVTADASLFT
NSAINAVRFT GSGTINGLNA TQAANVTVTA NATPVIGITG ASDVGQIDTV KITADDGAAA
VSTITLANVN AAGVENLQFV ATDAITVSSL TSSAAVTGIT VTGAHDVSIT TGALGVNVNT
AIDASALTGA FTLDASAATG ANGLSVTSGT GNDTITGTAN ADIIRVGAGN DTVTAGAGID
RIDLGAGNDT VVFGEAFAAG NANHDVVTGF TFGAASEDKY DIGFTVANGT TNATANLAAL
APVAVADNGS ASANDVIFTF SGANDKLAAN TTATTAVANA VTALTSGGDF AASNVTAGDS
LVLVLDNGTD SFIFHYVADA TPATTSAADL ELIGVVTGQL ASQVVTGDFI