| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0028 |
|---|
| Symbol | |
|---|
| ID | 3833359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007641 |
|---|
| Strand | + |
|---|
| Start bp | 26248 |
|---|
| End bp | 27666 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637824047 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_425064 |
|---|
| Protein GI | 83582758 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTG ACCCCACTTC CGGAGCCGCG ATCACCGTTG AGGGCTTAAA GAAGGTCTTC
CGTATTTACG AGCGTCCCCG TGACCGCATC CTGCAGCTCA TCCTGCCCGG TAAGCGCAAG
TTTTATCGCG AGTTCCAGGC GCTCGACGAT GTCTCTTTCA CGGTCCAAAA AGGTCAGGCC
GTTGGCATCA TCGGTCGCAA CGGATCGGGG AAATCAACCC TGCTGCAGAT GATCTGCGGC
ATCCTTCATC CCACGGCAGG CAAGGTCTCC TGTTCGGGCC GAGTGGCTGC TTTGCTTGAA
CTGGGAGCAG GGTTCAATCC GGATTTCACC GGCCGTGAAA ACGTCTATAT GAACGCCACG
CTGCTGGGTC TGACCACGGC GGCGGTCGAT GAGCGCATGG ATGATATTCT GGCCTTTGCC
GAGATCGGCG ATTTCATCGA TCACCCGGTG AAGACCTATT CAAGCGGCAT GTTCGTCCGT
TTGGCCTTTG CGGTGATGGC TCATGTCGAT GCGGAGATTC TGATCATCGA CGAGGCCCTG
GCCGTGGGAG ACGCCGCCTT TGGGCAAAAG TGCATGCGCT TCCTCCGCCG CTTTCGCGAG
ACGGGAACCA TTCTCTTCGT CAGCCATGAC ACGGCGGCCG TGATCGGGCT CTGCGACCGG
GCTGTTTGGC TTGATCGCGG CAAGATGATC ATCGAAGGCG ATGCCAAAAC CGTTTGCGAG
GCCTATTACG GTCATCTTTT CGGGGGAACG GTGGAGACGC CCCCCGAGAA AACCGTGGAG
GCGATTACGC CATCTCCCGC CCCCGAAGGA CCGCGGCCTA AGGTCCGGGC CGAGGATTGG
GTGGATGGTC GGCGCGAATG GATCAACCAC TCTTCGCTGC GCAATGACAT CGAGGTTTTC
ACCTTCGATC CCTCGGGCAC CGATTTCGGC GCCGGTGGCG CGGAGATCGA GGATGTCCGC
CTGACCGATG ACGATGGCCA CCCCTATGCC TGGATCGTCG GGGGCGAGCC AACGCGTTTG
CGGGTGACGG TCCGTGTTCG CGATGAGTTG CGCAGTCCGA TCATCGGCTT TTTCGTGAAG
GACCGTCTGG GCCAAACGCT GTTTGGCGAT AACACCTTCA TGAACGAGAA GAAATTATCG
AAACCGGCGC TGCCTGGTCA AATCCTGGAA GCAAACTTCC GCTTTCCCAT GCCGATCCTA
CCCCCTGGAA CCTATTCGAT CGCCGTTGCC GTCGCCGATG GCACCCAGAC CGATCACGTC
CAGCATCATT GGCTTCATGA CGCGGTGATG GTCAAATCCC ACGTCTCGCA TGCGACGGCG
GGGCTGGTCG GCATTCCCAT GTTCGAGGTT CGGTTTGAAT GCCACGACCC GGTTGCTTCC
CCGTCTTCGT CCATGGACAA GGTCGGGATC GTCGACTGA
|
|---|
| Protein sequence | MSSDPTSGAA ITVEGLKKVF RIYERPRDRI LQLILPGKRK FYREFQALDD VSFTVQKGQA
VGIIGRNGSG KSTLLQMICG ILHPTAGKVS CSGRVAALLE LGAGFNPDFT GRENVYMNAT
LLGLTTAAVD ERMDDILAFA EIGDFIDHPV KTYSSGMFVR LAFAVMAHVD AEILIIDEAL
AVGDAAFGQK CMRFLRRFRE TGTILFVSHD TAAVIGLCDR AVWLDRGKMI IEGDAKTVCE
AYYGHLFGGT VETPPEKTVE AITPSPAPEG PRPKVRAEDW VDGRREWINH SSLRNDIEVF
TFDPSGTDFG AGGAEIEDVR LTDDDGHPYA WIVGGEPTRL RVTVRVRDEL RSPIIGFFVK
DRLGQTLFGD NTFMNEKKLS KPALPGQILE ANFRFPMPIL PPGTYSIAVA VADGTQTDHV
QHHWLHDAVM VKSHVSHATA GLVGIPMFEV RFECHDPVAS PSSSMDKVGI VD
|
|---|
| |