| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0024 |
|---|
| Symbol | |
|---|
| ID | 3833355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007641 |
|---|
| Strand | - |
|---|
| Start bp | 22802 |
|---|
| End bp | 23734 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637824043 |
|---|
| Product | RepA-related protein |
|---|
| Protein accession | YP_425060 |
|---|
| Protein GI | 83582754 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5534] Plasmid replication initiator protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTC CTCCCTCGGA TGATCCCGAT CCCTTTGCCC GCCATAAGGC GGCCCTCAAG
GCACGATCTC TGCGCAGCGC TCCGGCGGAC GCCCAGGGCG ATCTGTTCGT CCCGGCGCTG
GTCGATATCG GCGCACGCGA CGGCCGCTCA ATCATGGACG TGGCGGTGTT CCGCCTGTCG
AAGAAGGACC GCCGCGCCGG CGACGTGATC CGCTATGAAC TGCCCGACGG CTATGTCCAG
GTATCGGCGG GCCCGGCTGG TATGGCCTCC GTGTGGGATT ATGACCTCGT CCTCATGGCC
ATATCCCATA TCACCGAGGC GGCGAACCGC TGGCGGGCGG GGAAGGGCGA GAAGCCGGGG
CGGTTGTTCC GGCCCCATAT CTCCGAGGTG CTGAAGTTCT GCCGGCGGGA CCTAGGGGGC
AAGCAAAAGT CCAATCTGGT TGAGACTTGC TTGAGGTTGA GTACCACCCA CGTTGCAATG
CGGCGATCCC GAACGACCGA GAGCGGGAAG GTGGTTACGG TGTCGGAGGG GGAATCCCTC
ATCAGTTGGT ACAAGGTGGT CGAGAGCGGG AATGGAAACC CCGAGTACCT TGAAATCGAA
ATCGCAAAAT GGATGTATAA GGAGGTCATC GACGGGAAGA ACCCAGACGT TCTGACCGTT
CACCCGGACT ATTTTCTGAT AGACCTCGGC ATAGGTCGCT TTATTTACCG CCTCGCGCGC
CGGGCGGCCG GGAAAGGCGA GGCGCGATGG GCGTTCCAAA CGCTGTTCGA GCGGAGCGGC
AGCGCGGGAT CATCCCGGGA ATTTGCCCGG CTGTTGCGCA AGGTGATCGC AGCCAATGAC
CTGCCTGAAT ATGCGCTATC CGAGGAGACG GGGCAGAGCG GGGCCATTCT TGTCATGCGC
AATCGGGCGG GCCTTCCTCC CCCCTGTGTG TAA
|
|---|
| Protein sequence | MPLPPSDDPD PFARHKAALK ARSLRSAPAD AQGDLFVPAL VDIGARDGRS IMDVAVFRLS
KKDRRAGDVI RYELPDGYVQ VSAGPAGMAS VWDYDLVLMA ISHITEAANR WRAGKGEKPG
RLFRPHISEV LKFCRRDLGG KQKSNLVETC LRLSTTHVAM RRSRTTESGK VVTVSEGESL
ISWYKVVESG NGNPEYLEIE IAKWMYKEVI DGKNPDVLTV HPDYFLIDLG IGRFIYRLAR
RAAGKGEARW AFQTLFERSG SAGSSREFAR LLRKVIAAND LPEYALSEET GQSGAILVMR
NRAGLPPPCV
|
|---|
| |