| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0020 |
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| Symbol | |
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| ID | 3833351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007641 |
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| Strand | + |
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| Start bp | 18918 |
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| End bp | 20465 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824039 |
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| Product | major facilitator transporter |
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| Protein accession | YP_425056 |
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| Protein GI | 83582750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGCG TATCCACTCC CCGGATTCCA GCGGCGGATG CGCCGTTCGC CTCGCCCGAC
ACCCCCGCCC GTCGCCAAGC GATCCTCGCG GTCATGGTCG GCTGCGCCGC TCTGGTCTTT
GGCCTGGGCG CCAGCCTGAA CCTAGCGGTC GGGCGTATCG CCACCAGCCC GCTCCATCCT
TCCGCCACGG CGGTGCTGTG GATCGTCGAC ACATATCTCG TGGTCTTCGG TTGCCTGCTG
ATTCCGGCCG GGGCCATCGG GGATCGCTAT GGCCGCAAGC AGGCCATGCT GGCGGGTCTC
ACGTTCCTGG CTGTTGGCTC CCTGCTGTCC GCCGTTGCGG CCACCGTGCC CGTGCTGCTG
GCCGGCCGAG CAGTCGCCGG CGCGGGCGCG GCACTGATCC TGCCGAACAG CCTCGCGCTG
GTCGTCCAGG TCTATCCGGC CGACCAGAAA TCCCATGCCA TCGCTGTATG GACCGGCATG
ACCGGCCTGG GCGGCGCGCT CGGGAATATC CTCGGCGGGC TTGTGCTGCA GTTCGCCGAA
TGGCAGGCGA TCTTCACCGT TGCGGTGCCG TTGGCCCTTG CAGGCCTCGC GCTGACGGCG
TGGCTGGCGC CACGGCAAGC GGGACACGAG CATCCGCTCG ACCTCGTCGG CGCCGGCATT
CTCATGCTGA GCATATTCGC CCTGTTGACG GGACTGATCG AAGGCCAGGA GCTGGGCTGG
GCCTCGACGG AGGTGATCGG CGCCTTATGC GCCGCGGCGG CGCTCCTCGC AGTATTCCTC
ACCACCGCGG CGAGGCGGAA GCACCCCCTC GTCGATCCGC GCATCTTCCG TGCCCGCGGC
CTCTGCGCCG GCATGCTCGG CATCACCGCA TCCTTCATCG CCATGTATTC GCTGTTCTAT
CTGAACGGCC AATACCTGAT GAGCGTGAAG GGCTATCCGC CGGCTCTGGC CGGCATATGC
ACCCTGCCGC TGGTGGTCGT CCTGTTCTGG CTGTCACCGC GCAGCGTCCA GCTCGCCCGT
CGCTTCGGTG CGCGGCCGGT GGTCGCCGTC GGCCTGGCAA TGCTCATCGT CGGGCTGGGC
CTTCTGCGGC TTTGCGGCGC GGATACGTCC TACTGGTTCT ATGCCGCGAG CATCGGCGTT
ATCGGCATCG GCTCGGCGCT GTCCAATCCT GTCCTGTCGA CCGCGATCAT CGGTGCGCTG
CCGCCGCATC AGGCAGGTGT CGGCTCCGGC ATCAACAGCT TCACGCGTGA AATCGGCGGC
GCTTTGGGCG TTGCTCTGTT TGGCAGCCTG CTGGGGAGCA GCTTCCCGTC GCGTTTGCCC
GACACCCTGG CGCAGGCTCA TGGCGCTGTG CAACGGTCGG TCGGCGCCGC ACTGGCCTAT
GCAGAATCCC TGCCAGGAAC GGCGGCCAAT CAGACGGTAC AGGTCGTACG TCAAGCCTTC
TCCGGCGCAA TGGCACAATC GCTGCTCACG GTGATGCTGG TTCTGGCGGT CGCTGCTGTG
TTGGCGGTGC TTTGGTATCC GGCCTCCGCA GGATCGGCCG AAAAGTGA
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| Protein sequence | MSGVSTPRIP AADAPFASPD TPARRQAILA VMVGCAALVF GLGASLNLAV GRIATSPLHP
SATAVLWIVD TYLVVFGCLL IPAGAIGDRY GRKQAMLAGL TFLAVGSLLS AVAATVPVLL
AGRAVAGAGA ALILPNSLAL VVQVYPADQK SHAIAVWTGM TGLGGALGNI LGGLVLQFAE
WQAIFTVAVP LALAGLALTA WLAPRQAGHE HPLDLVGAGI LMLSIFALLT GLIEGQELGW
ASTEVIGALC AAAALLAVFL TTAARRKHPL VDPRIFRARG LCAGMLGITA SFIAMYSLFY
LNGQYLMSVK GYPPALAGIC TLPLVVVLFW LSPRSVQLAR RFGARPVVAV GLAMLIVGLG
LLRLCGADTS YWFYAASIGV IGIGSALSNP VLSTAIIGAL PPHQAGVGSG INSFTREIGG
ALGVALFGSL LGSSFPSRLP DTLAQAHGAV QRSVGAALAY AESLPGTAAN QTVQVVRQAF
SGAMAQSLLT VMLVLAVAAV LAVLWYPASA GSAEK
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