| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0007 |
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| Symbol | |
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| ID | 3833388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007641 |
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| Strand | - |
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| Start bp | 6225 |
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| End bp | 9935 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637824026 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_425043 |
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| Protein GI | 83582737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCACC GCGCGAGCGC CTTCATGACC GATATCACCC CCATTGCTCC TGCCATTTCC
TCTGCCTCGG ATCCCGTATG GCGACAGGCC GGATTGGAAA CGCTGGTGCC GCGGCGATTG
GTGCAACCGG ATTCCTGGGC GGGTCACATT CCTTTTGCCT TTTGGGTCAT CGCCCAGCAC
CGCCCCCGCC AGTGTGTCGA ACTGGGTGTC CATACCGGCA ATTCCTACTG CGCCTTCGCG
CAAGCGGTTG AGCATCTTGG TCTTGAGACC AAGTGTGTGG GGGTGGATCA TTGGTTTGGT
GATCCGCAGG CTGGATATTA TGGCGAGGAC GTCTACGCCG ATCTTAAAGC CCATCACGAT
CCCCTTTATG GCCATTTCTC CCGTCTTCTC CGCATGAGCT TTGAAGACGG CCGAGCCTAT
GTGGCCGACG GCTCCGTCGA TCTTCTGCAT ATCGATGGAT TGCATACCTA CGAAGCGGTT
CGCGAAGATT TCGAGACGTG GCATTCGAAG ATGAGCGAGA GGGGTATCGT TCTTTTCCAT
GACACCGATG TTCGGACCGA TGACTTCGGA GTTTGGCGGT TTTGGGCGGA AATCGCCGAG
CGGTTTCCAT CTTTTGAATT TGATCACAGC AATGGGCTTG GCGTCGCCTA TGTCGGTACC
CGCCCCATAG AGGCGCCTGG TCTGGCCGAG CTCTTCGCCG CCGGATCTGA TCCCCAGGCC
AGGGATCTTC CGCGACGGTA TTTCGCCCGG ATGGGGGAAG GCTGGATCAA CCGGGTGCGG
CTCGATCTGG CGACCGAGCA ATGGAATGCC ACCACAAACG CCTTGAATCA TCTGCAGGCT
AGGATCGATG AAATCGAGCG TGATCGCCTG GGGCTGCGTC GGGAACGCGA GATTTTGCTT
CAGCGCTTGA TCAAAGTCGA TCAATGGGAT GCTCTTGCTC TGCAGTGCCG CGATGGCCTG
GATATTGATC TCGACGCGCT TGCCGAAGCG ATCGGCGGTT TGTACAACGC CGATCAGCCG
CAGGCGATCG AGGCCCGGGC GACGTTGCAT CGGGTGTTGC GACATCTGAT CGAGGAGGGG
ACTTGCGGGT CCGTCCCTGG GGATGTCAGC CGACGGCTGA TGCGCCTTTC CAAAAAGGCG
GGCGCGCGGG TTGTTGCGCC TTTCAAAGCT CCTGCGAAAA AGCAAGAGCG TCCCTTGGAT
TTCCTTCGGG AAAGCGGCTT CTTTGATGAG TCTTTTTATG CTCTGAGCTC GGAGGCCCTC
GCCGAGGGTC GCGATCCTTT GGAACATTAC CTCACGGTAG GGGAAGCGAT GGGCGTTGCT
CCTTCGCGTT CTTTCGAGCC CGAGTACTAT GCCCGCCGTC ATCCCGATGT CCTGGCCTCT
GGCATGGGGC TTTTGCGCCA TTATGCCAGA TTCGGTGCGC AGGAGGGCCG GCAGGGATTA
TCTCCCGCTC GTCGTCTGGC CCTTCCCGAT CTTTCTGCAG CCACGCGGGA AAAAGTTGTT
CTCCTCCTCC AGGACGCTTC GGGGAGTGAT GTCTCCCTCT ATGGCTTGTT CCTCGCCAGG
GCCTTACAAG ACCTACATGA GGTGATCGTC TTTCTCAAAG AAGATGGCCC GCTTCGTTCG
GCTTTTAAGG AGAGTGGGAT CACGCTTATC GATATGCCTT CGGAGACCGA GCTTTTCCGA
TGCGATATCA ATGCCGTGGC CAAGCGCCTC GTAGAAGCCC TTCAGCCAGC TTATGTGATC
GCCAATAGCG CAGAAACGCG CAGTTTCGTC CCCCCTATCG TTCAGGCTGG TTTTGGTGTT
GTCGCCCTGG TCCAAGACTT TGCCTTCAGC GTTTATCCAA AAAATGAAAT TTATGAAATA
TTCGCCTGGG CTCATCATTT GGTCTTTCCC GCAAGGGCGA TTATGGAATC CTTTGTCGAG
GATCATCCCT TCCTGGGGCA AAGACGATAC GAGATCCTTC CTCAAGGGAT TCCCGCTCTT
CCTGAGCTAG ACGCCCGCCT GCCTTCGAAA CAGGGATCAG CGCTCCGGCC TGCCGGGCAT
GAGGACGATT TCGTTGTCGT TGGTATCGGA CCGCTTCGGT TTGAGAAAGG CGCCGATCTT
TTCGTTTCAG TCGCAACGGC TGCGTTGCAG GAGCGTCCAG ACGCCAATCT TCGTTTTGTG
TGGATTGATC AAACGCCGTC CTTCGATGAG CAAGCGGAGT TCTCAAAATA CCTTCAAGAG
CAGATCTTGC GGGCGGGTTT GAGCGAGCAT TTCTCCGTTC TTGGCGCTCT TGATGGGACC
GATGTTTACG AACAGGCCGA TCTTCTGGCT CTGACATCGC GATTGGATCC GATGCCCCGG
GTCTATGTCG AGGCCCTCAC CCAGGGAAAG CCCGTGGCTT GCTTCGAACA TGCCAGTGGC
CTTGCCGAAG TTTTGGCAGG CAACGAGGAA ACCCGCAGCC TTGTCGTTCC CTATCTCGAC
ACGACGGCCA TGGCGAAGGC GATTTTGGCC TTTTATGACG ACCCTGTTCG CCAGGAATCC
CTGGTGCCTA CTTTGCGTGA CAAAGCCAGA GAGACCTTCT GCATGGCCTC ATACCTGTCC
CGGGTTGAAG CTTTGGGCCA GCAAGCCAGT AGGGAGGCCA AGGGGATCAG TCATGACTAT
GAAAAGATCT CTGCCAGCGG CTTGTTCAAA GCGAGCTTTT TGACGCCATC GGTATCTGAA
GAAACGACGG AAGAAACTCT TAAAGGATAT CTTGTCCGTA ATAGAATTGG CGCTTCAAAA
TCTCAATCCG ATAACTGGAT TGATCTTAGG AGGCCGGTCA TTGGGTTTAA TCCCCTTGTC
TATGCAGAAA ATATATCAGG ATTAAATGGT CATAAAGATC CTCTGGCTGA TTGGATAGAA
CGGGGATCTC CAAAGGGAAA TTGGACTCAC CCGGTTATTG ATCTAGAAAC CTCGTTACCG
TCCCCTATTG AAGGGGGGAA GGTCCTTTTG CATGGTCATT TTTATTATGT TGATCTTATA
GATGATTTTT TGAAGAAAAT TATCATAAAT GATTTTAGTT GTGATTTGAT AATCACAACG
ACTGATGAAG ACCGCGCCGT CTTCTTAAGA AAAAAGCTAG AAGAATATAA AAATGGATCT
GTCGAAGTCC GTGTCGTTCC GAACATAGGG CGGGATGTCG GGGCTTTTTT TACCGGACTT
TCTGACCTGA AAAATAGTGA CTACGATGTG GTTGGTCACA TTCATGGTAA AAAATCGATT
CATCTCTCAG ATGGAACAGG AAATAAATGG AGAAACTTCC TATGGGAACA TCTGATCGGT
GGAGAAAAGA AAGCGGCCGC TATAGCGGTA TCGGCGCTTA TCAGAAACCC TGATATCGGG
TTGGTCTTTG CGGAAGAACC TTTTCTTTTC GGATGGGATA AGAATAAAGA ATTAGCAAAT
GATCTCGCAA AAAAAATGGG AATAGAGAAA TCTCTTCCAC GGTTTTTTGA TTGGCCGATT
GGAACGATGT TCTGGGCAAA AAGAAAGGCA TTAGAGCCCA TTTTTGATCT AAATCTTAGA
TGGGAGGATT ATCCCCCGGA GCCTATCCCG GTATATGGGA CAATGCTGCA CGCTCTTGAA
CGGCTGCTTC CTTTTGCCGT AGAGAAGGCA GGATTTTCTT TCGCAACGAC ATATCTGCCA
AGCAACAGTG ATAATATTTT TCGGACGCCT ATCGATAAAG TTGGGAGCTG A
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| Protein sequence | MFHRASAFMT DITPIAPAIS SASDPVWRQA GLETLVPRRL VQPDSWAGHI PFAFWVIAQH
RPRQCVELGV HTGNSYCAFA QAVEHLGLET KCVGVDHWFG DPQAGYYGED VYADLKAHHD
PLYGHFSRLL RMSFEDGRAY VADGSVDLLH IDGLHTYEAV REDFETWHSK MSERGIVLFH
DTDVRTDDFG VWRFWAEIAE RFPSFEFDHS NGLGVAYVGT RPIEAPGLAE LFAAGSDPQA
RDLPRRYFAR MGEGWINRVR LDLATEQWNA TTNALNHLQA RIDEIERDRL GLRREREILL
QRLIKVDQWD ALALQCRDGL DIDLDALAEA IGGLYNADQP QAIEARATLH RVLRHLIEEG
TCGSVPGDVS RRLMRLSKKA GARVVAPFKA PAKKQERPLD FLRESGFFDE SFYALSSEAL
AEGRDPLEHY LTVGEAMGVA PSRSFEPEYY ARRHPDVLAS GMGLLRHYAR FGAQEGRQGL
SPARRLALPD LSAATREKVV LLLQDASGSD VSLYGLFLAR ALQDLHEVIV FLKEDGPLRS
AFKESGITLI DMPSETELFR CDINAVAKRL VEALQPAYVI ANSAETRSFV PPIVQAGFGV
VALVQDFAFS VYPKNEIYEI FAWAHHLVFP ARAIMESFVE DHPFLGQRRY EILPQGIPAL
PELDARLPSK QGSALRPAGH EDDFVVVGIG PLRFEKGADL FVSVATAALQ ERPDANLRFV
WIDQTPSFDE QAEFSKYLQE QILRAGLSEH FSVLGALDGT DVYEQADLLA LTSRLDPMPR
VYVEALTQGK PVACFEHASG LAEVLAGNEE TRSLVVPYLD TTAMAKAILA FYDDPVRQES
LVPTLRDKAR ETFCMASYLS RVEALGQQAS REAKGISHDY EKISASGLFK ASFLTPSVSE
ETTEETLKGY LVRNRIGASK SQSDNWIDLR RPVIGFNPLV YAENISGLNG HKDPLADWIE
RGSPKGNWTH PVIDLETSLP SPIEGGKVLL HGHFYYVDLI DDFLKKIIIN DFSCDLIITT
TDEDRAVFLR KKLEEYKNGS VEVRVVPNIG RDVGAFFTGL SDLKNSDYDV VGHIHGKKSI
HLSDGTGNKW RNFLWEHLIG GEKKAAAIAV SALIRNPDIG LVFAEEPFLF GWDKNKELAN
DLAKKMGIEK SLPRFFDWPI GTMFWAKRKA LEPIFDLNLR WEDYPPEPIP VYGTMLHALE
RLLPFAVEKA GFSFATTYLP SNSDNIFRTP IDKVGS
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