| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0819 |
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| Symbol | trmE |
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| ID | 3828863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | - |
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| Start bp | 946228 |
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| End bp | 947586 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 4 |
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| GC content | 24% |
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| IMG OID | 637823968 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_424766 |
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| Protein GI | 83319722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAATAA ATGATACAGT AGTTGCCCCT GCTACAAATA TTTCAACTCA AGCTATTGCT
TTAATTAGAG TTAGTGGTTC TGAAGCTTTT TTAATAGTTA ACAAACTGAT TAAAGATAAA
AAACTAGAAG AAAAAAGAGG ACTATTTTTA AGAAAATTGT ATTTTGAAGA CGAATTAATT
GATGAAGTAG TTTTATCTTG TTTTGTTGCT CCTAATTCTT TTACTGGTGA AAATGTTGTT
GAAATTGCTT GTCATGGTGG AATTTTAAAT ACTAATAAAA TCATCAATAT TTTAATTCAA
TCAGGAGCTA GAATGGCTTT AAGAGGAGAA TTTAGTCAAC GTTCTTTTTT AAATGGAAAA
ATTGATTTAA TTCAAGCTGA AGGTATTAAT AATTTAATTC ATGCAAAAAA TGATCTAGCT
TTAAAAATTG GTGTTGCTAA TATGAGTGGA TCTAATAATA AAGCAATTAT TGAATTAAAA
GATAATTTAT TAGATATTAT TAGTCGTATT CAAGTTTCAA TTGATTATCC TGATTATGAT
GATGTTGAAG GATCAAGTAT AGAAGATTTA ACTAATTTAT TAGAAATTAT TAATGATCAA
ATTAATAAAC TTTTAATGAG ATCTAAAATG GCTTTTAAAA ACTCTGAAGG AATCAAAACT
GCTATTGTTG GTCAAACTAA TGTTGGTAAA TCATCAATTT TAAATGCTTT AATTAATGAA
GACAAAGCAA TTGTTACAGA TATTCCAGGA ACTACTAGAG ATATAGTTGA AGGACAAATT
AATTTAGAAA ATGTTAGTTT AAATTTAATT GATACAGCCG GAATTAGAAA AACTAGTGAT
GTTGTTGAAA ATTTAGGAAT TTTAAAATCT AAAAACTTAA TCAATGAAGC TGATTTAGTT
TTATTTGTTG TTAATAAAGA AAATATTAAT GATTTAGATA ATCAAGAAAT TTTTGAACTT
TTAAAAGATA AAACTTATAT TTTGATTGTA AATAAGGCTG AAAAACTAAG TCAAACTGAA
AAACAAAACT TAGAAAAAAA ATATGAAAAT ATTGTATTTA CTAGTGCTAT AAATCACGAT
ATAGATCAAT TAGTTTTAAG AATTAATCAA ATGTATTTAA ATGAAGAGAT TAGTAAAAGT
GATGAATTAA TTTTAATTGG ATTAAATCAA ATTACTTTAG TTGAACAAAT TAAAAACAAG
CTTTCAACTG CTTTAAGCGT AATTAAATCA GGAATGCCAA TTGATATAGT AAATGTTGAT
TTATATGATG CTTGAAATTT ATTAAATGAA CTAATTGGTG TTGAGTATGA AGATGAAATT
ATTGATAATA TCTTTAGAAA ATATTGTTTA GGAAAATAA
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| Protein sequence | MLINDTVVAP ATNISTQAIA LIRVSGSEAF LIVNKLIKDK KLEEKRGLFL RKLYFEDELI
DEVVLSCFVA PNSFTGENVV EIACHGGILN TNKIINILIQ SGARMALRGE FSQRSFLNGK
IDLIQAEGIN NLIHAKNDLA LKIGVANMSG SNNKAIIELK DNLLDIISRI QVSIDYPDYD
DVEGSSIEDL TNLLEIINDQ INKLLMRSKM AFKNSEGIKT AIVGQTNVGK SSILNALINE
DKAIVTDIPG TTRDIVEGQI NLENVSLNLI DTAGIRKTSD VVENLGILKS KNLINEADLV
LFVVNKENIN DLDNQEIFEL LKDKTYILIV NKAEKLSQTE KQNLEKKYEN IVFTSAINHD
IDQLVLRINQ MYLNEEISKS DELILIGLNQ ITLVEQIKNK LSTALSVIKS GMPIDIVNVD
LYDAWNLLNE LIGVEYEDEI IDNIFRKYCL GK
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