Gene MCAP_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0542 
Symbol 
ID3828937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand- 
Start bp651769 
End bp652392 
Gene Length624 bp 
Protein Length207 aa 
Translation table4 
GC content23% 
IMG OID637823697 
Productribonuclease HII, putative 
Protein accessionYP_424513 
Protein GI83319843 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.597529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA GAAAGTCATT TGATGATCAA ATTAAACTAG ATCATAATAT TACTTATTTA 
TCAGGTAGTG ATGAAGCTGG TAGAGGTTGT TTAGCTGGTC CTTTAGTTGT TGCTAGTGTG 
ATTTTAAAAC CTGATTATTT TAACCCTTTA ATAAAAGATT CAAAAAAATT AAATCCAAAA 
ACTAGACAAG TTTTATTTGA TGAAATTATA AAAAATTGTT TAGATTATCA AATTATGATA 
ATTTCAAGCA AACAAGTTGA TGAACTTAAT CCTTTACAAG CTAGTTTATT AGGTTTTAAA 
ACAACAATTA GTAATTTAAA AATCACTCCA GATCTTGCTT TAATTGATGG TAATCAAAAT 
ATAAATTTAG AAAATATTAA AACTTTATCA ATTATTAAAG GTGATGATAA TAGTTTTTCT 
ATTGCTTGTA GTAGTATTTT AGCAAAAGTT ACTAGAGATA AAATACTAGA TCAATATGAT 
CAAATTTATC CAAATTATGG TTTTAAATCT CATAAAGGTT ATTGCACAAA AAAACACTTA 
CTAGCTATAC AAAAATATGG TGTTTTAGAT ATTCATAGAA AATCTTATAA ACCAATTAAA 
AAAATAAGCA AAGAAACTAG TTAA
 
Protein sequence
MINRKSFDDQ IKLDHNITYL SGSDEAGRGC LAGPLVVASV ILKPDYFNPL IKDSKKLNPK 
TRQVLFDEII KNCLDYQIMI ISSKQVDELN PLQASLLGFK TTISNLKITP DLALIDGNQN 
INLENIKTLS IIKGDDNSFS IACSSILAKV TRDKILDQYD QIYPNYGFKS HKGYCTKKHL 
LAIQKYGVLD IHRKSYKPIK KISKETS