Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCAP_0509 |
Symbol | |
ID | 3828702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
Kingdom | Bacteria |
Replicon accession | NC_007633 |
Strand | - |
Start bp | 607118 |
End bp | 609007 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 4 |
GC content | 15% |
IMG OID | 637823665 |
Product | peptidase C39 family protein |
Protein accession | YP_424482 |
Protein GI | 83319878 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00292307 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTAATT TTTTAAAATC ACCTCTAATA CATATATGAG AGGTGATTTT TATTAAACTG ATTAAACAAA GAGAATATAA TGACTGTTCA ATAGCTTGTC TAGTTATGAT TATTAATTAT TATTATAATC AAAATTATGA TTTAGATAGA TTAAAATTAG AAATTAATTA TTCAGAAGAA ATATTAAGTT TTTATGATAT AACTCAAATT TGTCAAAAAT ATTTTTTAAC TACTAAAGCT TTACAAATCC AAAATGATTT AGAACAAATA AATAAAAAGG TTTATTTAGC TCAAGTTGTT AATCAAGTTG GATTATTACA TTTTGTAGTT GTTGAAAAGC AAAATAATCA TTTAATAATT TATGATCCTT TAAAAGATAA AAAAGAAAAA ATTACTTATA AAGACTTTTA TCAAATTTTT ACTGGATATG TTTTAATTTT TAATTCTAAT TATAAAAAGT TTAAAGCCAA TTATACTAGT CTTTTTAAGT TATTTAATTT TTATTTAGGT TATTGTTTTT ATATTATTTT AAATGTTTTT AGTATATCAT TAACAATTTT AGAAATGAGA TTTTTATATG TTTATTCTTT ATCTATAACA AATCAAAATA ATTCTTATTT TTTATATTTA TATTTTTTAT GTATTTTTTT AATAAATATT TTTTTAAATG AAATATCTAA ATTTTTATTA AATAAGTACT ATCAAAAAAC TAAAACTAAA AAATTAGAAA TCTTTTATTA TTATTTAGTT GAAAATAATA TTAAATTAGA TGTTATAAAT AGTTATTCTG AAATTGAGTT TATAAGTAGT TTTCAAACTT ATGTTTTATT AAACACAATA AGTGGATTAA TTAATAGTTT AGTGATTCTT TTTGTAATTT TTTATATTAA TAAAATTATT TTTCTAGTCT TATTTAGTTT TGATATTTTT TGATTATTAA TTAGTTTAGT TCATAACTTT TTTATTAATA AAAATAAAAA AACTAGCAAA GCTAGTATAA ATTTATTAAC TCATTTTATT GATAAGAATA AATTAATTGA TGAAAAACTT ACTTTAAAAA TAATTAATAA AGATATTTTT AAAAATCAAG TTGACTATTT AAGTATTTTA TTTAATGTAT TAGAAAAAAT TAGTATGTTA TTAATTTATT ATTTAAGTTG AGATTTATTA AAGTTTAATT ATATAGAATT TAGCATTTTA TTAATTATTA TTTTATTTAA AGCAATTCAC ACAAGTGATT TAAAAAAGCT TGTTTACTTT TTACAAAATT TTATTAAATA CAAACAACTA TTAATTAAAT TTAATAATTA CAAAATAACT AATAATCATT TAAGATTAAA TGAAATTAAT AATATTCAAA TTAAAAATCT TTTAACTAAT TGTCAAATTA ATTTAGATCA AAAAATCAAT TATTTATCTA GTGATTATGA TCTTAAAACT TTTATTAAAA ATAAAAATAG TTCAGAAGAT ATTTTGATTT TAATAAACAA TGTAAATATT AAAGATATTT CTAAGTTTAG TTTAAATAAA CATATTTGTC ATTTAGATAA TCTTGAAATT AAATACACAA CAATTTTACA AAACATTATT ATTAATCAAT CTGAACTAAA TGTTTTTAAT CATGAATTAA TTCAAACTAT TATAAAAAAA TATCAAATTA ATTTAGTTAA AGTCATTAAT TTAGAAAATG TTAGTAAACT TGAACAAGAA TTTATTAAAC TATTAAGAAT CTTTTATTTA GATTATAAAT ATTTATTATT TAATGATAAT TTTGAAATTA TAGATAAAAA AGATATTGGT TTAGTTTTAG ATTTATTTAG AAGTTATTCA AATAGTTCAC TAATACTAAC AAGTAATGAT ATCAAGTATA ATCTAATTAG TAAGGATTAA
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Protein sequence | MVNFLKSPLI HIWEVIFIKL IKQREYNDCS IACLVMIINY YYNQNYDLDR LKLEINYSEE ILSFYDITQI CQKYFLTTKA LQIQNDLEQI NKKVYLAQVV NQVGLLHFVV VEKQNNHLII YDPLKDKKEK ITYKDFYQIF TGYVLIFNSN YKKFKANYTS LFKLFNFYLG YCFYIILNVF SISLTILEMR FLYVYSLSIT NQNNSYFLYL YFLCIFLINI FLNEISKFLL NKYYQKTKTK KLEIFYYYLV ENNIKLDVIN SYSEIEFISS FQTYVLLNTI SGLINSLVIL FVIFYINKII FLVLFSFDIF WLLISLVHNF FINKNKKTSK ASINLLTHFI DKNKLIDEKL TLKIINKDIF KNQVDYLSIL FNVLEKISML LIYYLSWDLL KFNYIEFSIL LIIILFKAIH TSDLKKLVYF LQNFIKYKQL LIKFNNYKIT NNHLRLNEIN NIQIKNLLTN CQINLDQKIN YLSSDYDLKT FIKNKNSSED ILILINNVNI KDISKFSLNK HICHLDNLEI KYTTILQNII INQSELNVFN HELIQTIIKK YQINLVKVIN LENVSKLEQE FIKLLRIFYL DYKYLLFNDN FEIIDKKDIG LVLDLFRSYS NSSLILTSND IKYNLISKD
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