| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0258 |
|---|
| Symbol | valS |
|---|
| ID | 3828894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | - |
|---|
| Start bp | 313797 |
|---|
| End bp | 316415 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 23% |
|---|
| IMG OID | 637823416 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_424244 |
|---|
| Protein GI | 83319485 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AATTAAACCC TAAGTATAAT CACATCTTAG TTGAAAAAAC TAAATATCAA
TATTGACTAG ATAAAAAATT GTTTAAAGCT AATCCTAATT CTAAAAAACC TAAATTTTCT
ATCATCTTAC CTCCACCAAA CGTTACTGGT AAATTACATA TTGGACATGC TTGAGATACT
AGCTTACAAG ATGCTATTAT TAGATTTAAA AAATTAACTG GATATGATAC TTTATTTTTA
CCTGGTATGG ATCATTCTGG AATCAGTACT CAAGTAAAAG TAGAACAAAA ACTTAAAAAA
CAAGGTATAG ATAAAAATAA ATTGGGTAGA GAAAAGTTTT TATTAGAAGC TTGAAAATGA
AAAGAAGAAT ATGCAAGTAT TATTAGAGAA CAATGAGCTA AATTAGGTTT AAGTTTAGAT
TATTCAACTG AAAAATTTAC TCTAGATGAA GATATTAATC AAATTGTTAA AGAGATTTTT
GTAAAGTTCT ATAATGATAA AATAATTTAT AAAGACAAAC AAATAGTTAA TTGAGATCCA
GAACAAAAAA CTGCTATTTC TAATGTTGAA GTAATTTATA AAGAAACTCA AAGTAAAATG
TATTATTTTA AATATATGTT AGAAAATTCT GACAAATATT TAATAGTTGC TACAACTCGT
CCTGAAACTA TGTTTGCTGA TCAATGTTTA GTTGTTAATC CAAACGATTC TAGATATCAA
GAATATATTA ATAAAAAAGT AATTAATCCA GTTAATAATC AAGTTATTCC AATTATAAGT
GATGAATATG TTGATATTGA ATTTGGAACT GGAGTTATGA AATGTACTCC TGCTCATGAT
TTAAATGACT ATCATTTAGC GATTAAACAT AATTTAAAAA TGCCAATTTG TTTAAATACT
GATGGTTCAG TTAATCAATT AGGTGGAAAA TATCAAGGTT TAGATAGATT TGTTGCTAGA
AAAGAAATCA TTAAAGATGC TATTAAAGAA GATTTGTTTG TAAAAGAAGA AGACATTATT
AATCAAGTTG GATTTAGTGA AAGATCAAAT GCTATTGTTG AACCATATTT ATCTGATCAG
TGATTTGTTA AAATGGATAA ATTTAAAAAT ATGGTAATTG ATTTACAAAA TTCAGATAAT
AAAATTAATT TTTTTCCAAA TAGATTTAGT GATGTTTTAA ATAGATGAAT GACTAATGCT
CATGATTGAT GTATTAGTAG ACAATTATGA TGAGGCCATC AAATTCCTTG CTGGTATCAC
AAAAAAACTA ATGAGATGTA TGTTGGAATT AATCCTCCAA GTGATATAGA AAACTGAACT
CAAGACCAAG ATGTTTTAGA TACTTGATTT TCATCAGGAC TATGAGCTTT TTCAACACTT
TTAAATAATA AAGACTTAGA AAGTGAATAT TTTAAAAATT ATTTTCCAAC TAGTGTTTTA
GTTACGGGAT ATGATATTAT TTTCTTTTGA GTAGCTAGAA TGATTTTTCA AACTTTAGAA
TATACAAAAC AAATTCCATT TAAAGATGTT TTAATTCATG GACTTGTAAG AGATGAATTA
AATAGAAAAA TGTCTAAATC TTTAGGTAAT GGAATAGATC CTATGGATGT TATTAATAAT
AATGGTTGTG ATTCGTTAAG ATTATTTTTA TTAACTAATT CAACTCCAGG TCAAGACATT
AGATATTCAA ATGAAAAAAT TTTAGCTAGT TGAAACTTTA TAAATAAATT ATGAAATGCA
AGTAGATATG TATTTTTAAA TTTAGATGAT CACTTTGAAT TTGATCCCAA CTTTTATAAA
ACTGACTTAG AAATAACTAA TCAATGAATT TTGACTCAAC TAAGTAAAAC ACAAGCTTAT
GTTTATGAAA AAATGAACAA ATATGAGTTT AGTTTAGCTG GAAATCATCT TTGAGATTTT
GTATGAAACA AATACTGTTC TTGATATATT GAATTTAGTA AAGTTAATTT AAGTAATGAT
AAATTTAACT ATCAAACTAA ACAAACTTTA TTTTATGTAT TAAAAGAAAT TTTAATTATG
CTTCATCCGT TAATACCATT TGTAAGTGAA GAAATTTATT TAAATATGAT GTTAAAAGAA
TCTATTCTTT TAGAACAATG AACTAATTTA AATTCTAATT ATGATACAAG TTTTATTGAT
GATGTTATTA AAATGATTAC AAGTATTAGA GAATTTAGAA ATACTAAAAA TATTAAAAAT
AATATTTGTT TATTAGCAAA TATTTCAAAC ACTAATGATA AACATTCTTA CATATTTGAA
AAGCATTTTT TACAAATTAA TAGTTTTTTA AAAAACTTTT GTAATACTAA ATTAGATAAT
TCTATTAAAA TATCTAATAA AACTAGTTTA TCAATTGATG AGTATTTTAT TGAAATTTCA
AATGATTCAT TTACTAATAA AGATGAGTTA ATTAAAGAAT TAGAAGCTAA ACAAATTCAA
TTAACTAATG AAATTTTAAG AAGTCAAAAA ATTTTAAATA ATTCTGAGTT TATTAAAAAG
GCAAAAATAG AGAAAATTGA ACAAGAAAAA TCTAAATATC AAACTTATAA AGAACAACTA
GAAGCAATTA ATAAAAAAAT TAATGATTTA AAAGCATAA
|
|---|
| Protein sequence | MKKQLNPKYN HILVEKTKYQ YWLDKKLFKA NPNSKKPKFS IILPPPNVTG KLHIGHAWDT
SLQDAIIRFK KLTGYDTLFL PGMDHSGIST QVKVEQKLKK QGIDKNKLGR EKFLLEAWKW
KEEYASIIRE QWAKLGLSLD YSTEKFTLDE DINQIVKEIF VKFYNDKIIY KDKQIVNWDP
EQKTAISNVE VIYKETQSKM YYFKYMLENS DKYLIVATTR PETMFADQCL VVNPNDSRYQ
EYINKKVINP VNNQVIPIIS DEYVDIEFGT GVMKCTPAHD LNDYHLAIKH NLKMPICLNT
DGSVNQLGGK YQGLDRFVAR KEIIKDAIKE DLFVKEEDII NQVGFSERSN AIVEPYLSDQ
WFVKMDKFKN MVIDLQNSDN KINFFPNRFS DVLNRWMTNA HDWCISRQLW WGHQIPCWYH
KKTNEMYVGI NPPSDIENWT QDQDVLDTWF SSGLWAFSTL LNNKDLESEY FKNYFPTSVL
VTGYDIIFFW VARMIFQTLE YTKQIPFKDV LIHGLVRDEL NRKMSKSLGN GIDPMDVINN
NGCDSLRLFL LTNSTPGQDI RYSNEKILAS WNFINKLWNA SRYVFLNLDD HFEFDPNFYK
TDLEITNQWI LTQLSKTQAY VYEKMNKYEF SLAGNHLWDF VWNKYCSWYI EFSKVNLSND
KFNYQTKQTL FYVLKEILIM LHPLIPFVSE EIYLNMMLKE SILLEQWTNL NSNYDTSFID
DVIKMITSIR EFRNTKNIKN NICLLANISN TNDKHSYIFE KHFLQINSFL KNFCNTKLDN
SIKISNKTSL SIDEYFIEIS NDSFTNKDEL IKELEAKQIQ LTNEILRSQK ILNNSEFIKK
AKIEKIEQEK SKYQTYKEQL EAINKKINDL KA
|
|---|
| |