Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NmulC_2793 |
Symbol | |
ID | 3786793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007616 |
Strand | + |
Start bp | 13678 |
End bp | 15663 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637812902 |
Product | TRAG protein |
Protein accession | YP_413489 |
Protein GI | 82703925 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0977234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTAACG ACATTCTGGC TTTGGGAGAA AGCCAGCCAA AATACAATCG CCGAGCATTG GCCTCGGCCC AATTTATTCC CCAGGAATAT CTAGACCGAC AGGGATACCG CAAAGGCGAT TTCTGGCTTG GCCGAACCCT CAACGGACGG CCTTTCGGTT GGAACGAGGA AATGAATCTG CTGACCTGTG CGGGACCAGG GGCAGGGAAG GGCGTTTCGA CAGTCGTACC GAACCTGCTG GAATTTCCTG GGAGCGCAGT GGTAGTGGAT CCAAAGGGAG AGCTGGCCAG CATGACTGCC GCTTTCCGTC GCGACGTGCT TGGACAGAAG GTCATCGTCC TGGATCCTGC GCGAACTGCT AAGGTAAGCG AGGATCTGCG CGGCACTTAC AACCCTTTCG ACGAACTGGA TGCGGACGAT CCCTTTGTTA CGACCGCCGC CCAGGTTATT GCCTCCGGGA TCGTCGTTCC CAATCCCAAG GCAAAAGAAC CGTTCTGGGA CGACAACGCT CTCGATTTCA TTCAGTCGTG CATCCTCTAT ATGGTGCGGC ATTATCCGCC TAATTTACGC ACCCTTATGA AGCTGCGGGA GACGGTTTCT ATGGGGGACA GCGACCTCTT CGATGCATAT GTACGGCGCA AACAAGAAGA GGATCCAGAT TTTATGGGAT CCGAAAGTGA TGCCTTCGGG CTGTTCCTGA AAGAAATGTT TAACACCCCG GACTTTGGCG GCGTGATACG TGAGACTGCC GCCAAAATCG GGCGAATGGG CGAAAACACG AAAGGCAGTG TACTTTCTAC AGCGGCCACA CATCTGGACT TCGTAAAATC CCCGGAACTT TGGGACGTGC TGCAATCGAA CCCGGACCCG TCTCGAACCT TCCGGCTGCG GGAGCTGAGA CGTAATGACC GGCCCCTCAC GGTCTATCTA TGCCTTCCTG TAGACATGAT CCCGCGTCAA GGAAGATGGT TTCGGATGAT CATATCCCGC ATCATCCAAT CCATCGAACG CAGCGAATTC GATAAAAAAC GAGATCACCC TGTTTTGATG ATGATCGACG AGTTTTTTCA GCTCGGTCCG ATTCCTTCTA TTACTAACAC CCTCACATAT TCACGAAGCT TTGGGCTGCG GCTGTGGCTA ATTGTGCAAG ATTTGAATCA GCTTAAAACC AATTACCCGG ACGCCTGGGA AACCATTCTC GGTTCCTGCG GAATAAAGCA GTTTTTCGGA GTAAACGATC TCGTTACCGC TAAATATGTT TCGGAATTGA TTGGGGAAGA AGAGATAGAT ATACCCTCGA TCTCGCTTAC CAAAACCTCT TCCGGGACGG AGAGCAGAAA CTCCTCGCAA ACGCACAGCC AAGGGATGAC CAGTACCGCC GGAAATAACT GGTCAAGCAG TACAGGAAGG TCTGTATCCT TTTCGCGCAC GAATAGCACA AACCATAACA TTACGACCGG GCGCGGGATT TCCAATAATC AGGCTGCCAG CAGCGGGGTA AGCGAAAGTT GGGGAAGCGG TGCCAATAAC GGGGAAACTA TTACAAATAG TCAACAAACT TCCCAGAACT CGGGACGCTC TGCGCACGCA ACTACGGGAC AAAATTACGG CGTTAGCAGC TCCCTTGGCC AGTCCTCCTC CCTATCTGGC TCGGCAGGCC AAAGCGCCTC TTCTGGCATG ACGTTTGGCT CAAGTATCTC GGACACCCGG GGCGGATCCA TCTCGACATC AGAAAGCCGA AATATCTCCA ACACGGCGGG AGAAGGTTCC TCTGTTTCAA CCGGGATAAA TTACGCTTTT TCTGTTTCCA AACAGAAAAG ACGGCTCCTG CGCCCCGAAG ATGTTCTGGT GAGCTTCACC AAAAAGAACC TGGTGCAACT TACGCATATT CGAGATCAGG GGGGCATGAT GCTATTCCGT ACCCCATTCT ATGCCGATCC GTATTTCCGA TTCCTTCTGA CGGAAAAAAC AAAAAATGAC ACATAA
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Protein sequence | MGNDILALGE SQPKYNRRAL ASAQFIPQEY LDRQGYRKGD FWLGRTLNGR PFGWNEEMNL LTCAGPGAGK GVSTVVPNLL EFPGSAVVVD PKGELASMTA AFRRDVLGQK VIVLDPARTA KVSEDLRGTY NPFDELDADD PFVTTAAQVI ASGIVVPNPK AKEPFWDDNA LDFIQSCILY MVRHYPPNLR TLMKLRETVS MGDSDLFDAY VRRKQEEDPD FMGSESDAFG LFLKEMFNTP DFGGVIRETA AKIGRMGENT KGSVLSTAAT HLDFVKSPEL WDVLQSNPDP SRTFRLRELR RNDRPLTVYL CLPVDMIPRQ GRWFRMIISR IIQSIERSEF DKKRDHPVLM MIDEFFQLGP IPSITNTLTY SRSFGLRLWL IVQDLNQLKT NYPDAWETIL GSCGIKQFFG VNDLVTAKYV SELIGEEEID IPSISLTKTS SGTESRNSSQ THSQGMTSTA GNNWSSSTGR SVSFSRTNST NHNITTGRGI SNNQAASSGV SESWGSGANN GETITNSQQT SQNSGRSAHA TTGQNYGVSS SLGQSSSLSG SAGQSASSGM TFGSSISDTR GGSISTSESR NISNTAGEGS SVSTGINYAF SVSKQKRRLL RPEDVLVSFT KKNLVQLTHI RDQGGMMLFR TPFYADPYFR FLLTEKTKND T
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