| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2641 |
|---|
| Symbol | prfA |
|---|
| ID | 3785252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 3026322 |
|---|
| End bp | 3027398 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637812730 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_413320 |
|---|
| Protein GI | 82703754 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA GTATGACTGC CAAGCTCACG CAACTCAGCG TGCGCCTGGA GGAGTTGAAT
CGTCTGCTGA GCAGCGAAAG CATCACGGTC AATCTCGATC AATACCGCAA GCTGACGCGC
GAACGTGCGG AGATTGCCCC CGTGGTCGAC CTGTATAACG CTTATCTGCA AAGCGAGCAG
GATATTCATA CCGCGCAGGA GATGGCTGCC GAGGCGGAAA TGCGCGAGTT TGCCGATGCC
GAGATACGGG ATGCCAAAGA GAGGCTGGTG CGTTATGGCG CGGAATTGCA GAAGCAATTG
CTGCCCAAAG ACCCGAACGA TGAGCGCAAT ATTTTTCTGG AGATCCGGGC CGGTACCGGA
GGAGACGAGT CCGCGCTGTT TGCGGCGGAC CTGTTCCGCA TGTATGCACG CTTTGCTGAA
CGCCAGCGCT GGCAGGTGGA AATCATTTCG CAAAGCCCGT CCGACGTCGG CGGATATAAG
GAAATCATTG CCAAGATCAG CGGTGAAGGC GCCTATTCCA AACTCAAGTT TGAATCGGGT
GGGCACCGGG TGCAGCGCGT GCCAGCGACC GAAACGCAGG GACGTATCCA TACTTCCGCT
TGCACCGTCG CGGTGATGCC GGAGGCAGAC GAGATCGAGG ATGTCGCGCT CAATCCTGCC
GAGCTGAGGA TCGATACTTT CCGTGCTTCC GGGGCGGGAG GCCAGCATAT CAACAAGACT
GATTCTGCCG TGCGCATCAC TCACCTGCCG ACGGGAATCG TGGTCGAATG CCAGGATGGC
CGTTCCCAAC ATAAAAACAA GGCGCAGGCG ATGAGCGTGC TGGCTGCGCG CATCCGCGAC
AAGCAGATGC AGGAGCAGCA AAGCAAACAG GCGGCAACGC GCAAGTCGCT GGTAGGCACG
GGTAATCGTT CAGGACGTAT CCGCACTTAC AATTTTCCCC AGGGGCGGAT AACGGATCAC
CGCATCAATC TGACGCTGTA CAAGATCGAG CAGATCATGG ATGGGGATTT GAACGAGCTT
TGCTCGGCCC TGCTGGCCGA GCATCAGGCC GAGCAGTTGG CGGCAATGGC GGAGTAG
|
|---|
| Protein sequence | MNKSMTAKLT QLSVRLEELN RLLSSESITV NLDQYRKLTR ERAEIAPVVD LYNAYLQSEQ
DIHTAQEMAA EAEMREFADA EIRDAKERLV RYGAELQKQL LPKDPNDERN IFLEIRAGTG
GDESALFAAD LFRMYARFAE RQRWQVEIIS QSPSDVGGYK EIIAKISGEG AYSKLKFESG
GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIEDVALNPA ELRIDTFRAS GAGGQHINKT
DSAVRITHLP TGIVVECQDG RSQHKNKAQA MSVLAARIRD KQMQEQQSKQ AATRKSLVGT
GNRSGRIRTY NFPQGRITDH RINLTLYKIE QIMDGDLNEL CSALLAEHQA EQLAAMAE
|
|---|
| |