| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2468 |
|---|
| Symbol | |
|---|
| ID | 3784817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 2819668 |
|---|
| End bp | 2822538 |
|---|
| Gene Length | 2871 bp |
|---|
| Protein Length | 956 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637812559 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_413149 |
|---|
| Protein GI | 82703583 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0692505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTT CCACAGATCA AACACCCCGG CCGGCAATGG CAGGCTACGA GTTTTCTTCG
AACCCTTCCG GCCACGATCC GCGCTATTCC CAATACAAGA TCATTCGCCG CAATGGCTCA
GTGGCCGGAT TCGAACCGAA CAAAATCTCC ATTGCCATGA CGAAAGCGTT TCTCGCAGTC
GAGGGCAGCC AGGGGGCTGC TTCGGCCAGG GTACGCGAAG TGGTGGCGCG CCTGACCGAA
GATGTGGTGA ACGCCTTGAT GCGCCGCCAG CCCTCGGGTG GAACCTTTCA TATCGAGGAT
ATCCAGGATC AGGTGGAACT GGCATTGATG CGCTCGGGCG AGCATGATGT GGCGCGGGCC
TATGTGCTGT ACCGCGAGGA TCGCGCGCGC AAGCGGGCGC AGCAAAAGGA AGCGGGTGCA
GCGGAGGCGG CCGGCAGCGT CCTGAACGTG CTCGAGGACG GGCGCAGGGT TCCGCTCGAT
ACCGCGAGAC TGTTGGCGCT GATCGGCTCC TGCTGCGAAG GTCTGGGTGA GGGGGTCGAT
CCTGCGCTGA TACTTAAAGC CACGCTCAAG GATTTATATG ATGGAGTGCC GATGGAGGAA
GTAAGGAAAT CGGTAATCCT GTCAGCACGG GCGTTGCTGG AAAAAGAGCC GGCCTACAGC
TACGTCACGG CGCGACTGCT GCTGCACTCG CTCCGCTTCG AGGTGCTGGG CGAGGAAATC
GTACAAAGGG AAATGGCCGG GCGCTATATG GAATATTTCC CGGCCTTCAT AAAGCGCGGA
ATCGAAGCCG AACTGCTGGA TGAGCGGCTG GCGCAGTTTG ACTTGCCCAG GCTGGCACAA
GCCCTCCATG CGGAGCGCGA TCTCAAATTT GGCTATCTCG GTTTGCAAAC CTTGTATGAC
CGTTATTTTC TGCATATACA GGAGCGCCGC ATCGAGTTGC CGCAGGCATT TTTCATGCGG
GTGGCGATGG GGCTTGCATT GAACGAAATC GATCGTGAAG CACGGGCGAT AGAGTTCTAC
CATGTGCTGT CCAACTTTGA TTTCATGAGT TCCACACCCA CCCTGTTTAA TTCCGGCACA
CGCCGCTCGC AGCTGTCTTC ATGCTATCTC ACGACAGTGC CGGACGACCT GGATGGGATT
TACGAGGGAA TCAAGGAAAA CGCGCTGCTT GCCAAGTATG CCGGAGGACT GGGTAATGAT
TGGACGCGTG TGCGGGCGAT GGGATCGCAT ATCAAGGGCA CCAACGGCAA GTCCCAGGGC
GTAGTCCCCT TTCTCAAGGT AGTATCCGAC ACGGCCGTGG CGGTAAACCA GGGCGGCAAA
CGCAAAGGCG CCGTTTGTGC CTACCTCGAA TCCTGGCATT TGGATATCGA GGAGTTTCTG
GAACTGCGCA AGAATACCGG GGACGATCGC CGGCGCACGC ATGACATGAA CACGGCCACA
TGGGTTCCCG ACCTGTTCAT GAAACGGGTA ATGGAAGGGG GCGAATGGAC GCTCTTTTCG
CCTTCCGACG TGCCCGATCT GCACGAAAAG TATGGCAAGG CATTTGAGCA GGCTTATCTC
GCCTACGAGG ATAAAGTCGC GCGCGGCGAA CTCGACCTGT ACAAGACGAT ACCCGCGGTG
CAGTTATGGC GCAAAATGCT GAGCATGCTG TTTGAAACCG GGCACCCATG GATCACCTTC
AAGGATGCCT GCAATATCCG CTCGCCGCAA AACCATATAG GGGTGGTGCA CAGTTCCAAT
CTCTGCACCG AGATAACGCT GAATACCAAT GATCAGGAAA TCGCGGTATG CAACCTTGGT
TCGATCAATC TGGCAGCCCA CATCGATGAT GGCGGGAAGC TGGATGCCGA CAAGCTCAAG
CGTACTGTCA GCCTCGCCAT GCGCATGCTC GACAATGTGA TCGATATCAA TTTCTATGCC
GTGGCCAAGG CGCGCAACTC CAATCTCAGG CACCGGCCGG TCGGGCTGGG TATCATGGGT
TTCCAGGATT GCCTGCACAG GATGCGCATT CCCTACGCTT CGGACGAAGC AGTGGAATTT
GCGGACCGTA CCATGGAAGC GATGGCCTAC CATGCCTACT GGGCCTCGAC CGAACTGGCC
GAAGAGCGGG GACGTTATGC TTCCTATCGC GGCAGTCTGT GGGACCGCGG CATTCTGCCC
CAGGATACGC TCGACCTGCT GCAGGAAGAA CGCGGCGGAT ACATCGAGGC GGACAGATCA
TCGACGCTGG ACTGGGAAGC GCTGCGCGAA CGCATCAGAA ACCATGGCAT GCGTAACTCC
AACTGCCTCG CAATAGCGCC CACCGCGACC ATTTCGAACA TTGTCGGCGT TTCAGCCAGC
ATCGAGCCAA CCTTCAAGAA TCTTTACGTC AAATCCAATT TGTCGGGAGA ATTCACCATT
GCCAACCAGT ACTTGGTAAG CGACCTGAAA AAGCTTGGGC TATGGGACGA GGTCATGATT
TCTGATATCA AGTATTTCGA TGGCGCCCTG GGCAAGATAG ACCGCGTACC GACCGAACTT
CGCAAGCTTT ATGCCACTGC CTTCGAGGTG GAACCCCAGT GGTTGATCGA GGCGGCAGCG
CGCCGGCAGA AATGGATAGA TCAGTCCCAG TCCCTGAATA TCTATATTGC GAGCGTCTCC
GGCAAAAAGC TGGATGAAAC CTACAAACTG GCCTGGGTGC GTGGCTTGAA GACGACCTAT
TATCTGCGCT CGCTCGGAGC AACGTCAGCA GAAAAATCTA CAGTCCAGGC TGGCTCTTTG
AATGCGGTGC CCGCAGAAGG AAGTCTGCCA GCCATGGGTG CGGCGGCAGT GCCGGCGACA
GACGTATCGT TCTGTTCCGT CGATGATCCG GAATGTGAAT CATGCCAATA A
|
|---|
| Protein sequence | MQLSTDQTPR PAMAGYEFSS NPSGHDPRYS QYKIIRRNGS VAGFEPNKIS IAMTKAFLAV
EGSQGAASAR VREVVARLTE DVVNALMRRQ PSGGTFHIED IQDQVELALM RSGEHDVARA
YVLYREDRAR KRAQQKEAGA AEAAGSVLNV LEDGRRVPLD TARLLALIGS CCEGLGEGVD
PALILKATLK DLYDGVPMEE VRKSVILSAR ALLEKEPAYS YVTARLLLHS LRFEVLGEEI
VQREMAGRYM EYFPAFIKRG IEAELLDERL AQFDLPRLAQ ALHAERDLKF GYLGLQTLYD
RYFLHIQERR IELPQAFFMR VAMGLALNEI DREARAIEFY HVLSNFDFMS STPTLFNSGT
RRSQLSSCYL TTVPDDLDGI YEGIKENALL AKYAGGLGND WTRVRAMGSH IKGTNGKSQG
VVPFLKVVSD TAVAVNQGGK RKGAVCAYLE SWHLDIEEFL ELRKNTGDDR RRTHDMNTAT
WVPDLFMKRV MEGGEWTLFS PSDVPDLHEK YGKAFEQAYL AYEDKVARGE LDLYKTIPAV
QLWRKMLSML FETGHPWITF KDACNIRSPQ NHIGVVHSSN LCTEITLNTN DQEIAVCNLG
SINLAAHIDD GGKLDADKLK RTVSLAMRML DNVIDINFYA VAKARNSNLR HRPVGLGIMG
FQDCLHRMRI PYASDEAVEF ADRTMEAMAY HAYWASTELA EERGRYASYR GSLWDRGILP
QDTLDLLQEE RGGYIEADRS STLDWEALRE RIRNHGMRNS NCLAIAPTAT ISNIVGVSAS
IEPTFKNLYV KSNLSGEFTI ANQYLVSDLK KLGLWDEVMI SDIKYFDGAL GKIDRVPTEL
RKLYATAFEV EPQWLIEAAA RRQKWIDQSQ SLNIYIASVS GKKLDETYKL AWVRGLKTTY
YLRSLGATSA EKSTVQAGSL NAVPAEGSLP AMGAAAVPAT DVSFCSVDDP ECESCQ
|
|---|
| |