| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1902 |
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| Symbol | |
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| ID | 3784274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 2189733 |
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| End bp | 2192102 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637811988 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_412589 |
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| Protein GI | 82703023 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0584402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTACA GAGGTAAAAT CGTGCGGCAT CGCTCGCTAT GTGCAGTTTT TTTATGGATG
GCAGTGGCAG GCTGGGTTAC CGAGGCTTGG GCCGTAAATC CCTCTGCCAC CCTGCCCGTC
GAGGAAATTG GCGTCCCGCC GAGCGTCCTG CCGGAAGCGG ATTCCCTGCG CGCCAGTAAA
TCCAGGTCTT CTGCCGGTCA GGATCTCGTT ACACTCAATT TCGTCAATGC CGATATTGAA
GGGGTAGTGA AAGCAGTCAG CGAAATTACC CGAAAAAATT TCATGCTCGA CCCCCGCGTC
AAGGGTACGA TCAACATCGT TTCAGCCAAG CCAGTGCCGA GGTCGTCGGT CTACGAAGTA
TTCCTGTCGG CACTGCGATT GCATGGATAT GCAGTCGTTG AGGATTACGG CATCATCAGG
ATCGTTCCGG AAAGTGATGC CAAGCTATAC CAGGGCCCGA CACTTGGTCC CACGAACAAG
CGGCAGCTCG CGGGCGACCG TATCCAGACA CAGGTATTCA CGCTGCAGTA CGAATCCGCG
GTGCAGATGG TGCCGATCCT GCGTCCGCTG ATCGCTCCAA ACAACAGTAT CACTGCAAAT
CCCAACAGTA ACACCCTGGT TATTACAGAC TACGCGAGCA ATCTCCAACG CCTGGCGAAA
ATAATTGATT CGGTGGATCA GCCAAGTGGA ACCGAGCCTG TCTCGATACC CCTTCAGCAC
GCCTCGGCGA TCGATGTCGC GCAAACCGTG AACCGGCTGT TTTCAGAATC GACGCAGTCC
CAGGCCGAGG GCGCCGCGGA CCCCACCCAG CAGCGTTTCA CAGTCGTCGC CGACGCCCGC
TCGAATACCC TCCTTGCACG CTCCGGAAAC CGGGCAGCGC TTGCGCGTCT GCGCCAGCTG
GTAACAGTGC TCGATTCTCC CACCAGCGCT GCCGGCAACA TGCACGTCGT CTTTCTCAAG
AATGCCGATG CAGTCAGGCT TGCCGAAACC CTCAGGGCGA TCTATCACAA CATGGCGTCC
CCGGTTTCCT CATCTTCGGG ACTGAGCCAG GGCACCGGCA CAGCTTTTGG AACATCTTCC
CTGGGTACAT CCACCGGCGG GGGGATGGGT GCCTCGTCAG GCACCTCAAC AGGGGGGTCG
ATGGGCACTT CCATGCCCGG TTCCAGCCTT GGTGCGGGGA CTGTTCCCGC TGCTTCCACC
GTCACCCCGG CTCCGATGCA AACTGGCGCA ACTTCCGCCA CCCCCGGCAT CATTCAGGCG
GATGCAGCCA CCAACTCGAT CATTATTACT GCCCCGGATG CTATTTATAA TAATTTGCGC
GCGGTGGTGG AGAAGCTCGA CGTGCGCCGC GTGCAGGTTT ATATTGAAGC GCTGATTGCC
GAAATCACTG CCGACAGAGC CGCGGAATTC GGCATCCAGT GGCAGAATCT GAGCAATGCC
GCGCAAGGTG GCACCCAGGT TTTCGGTGGC ACCAACTTCA ATGCCGGCAC TGCCGGAGGC
GGCAGTATCA TCTCCACCGC CCAGAATCCG ATAGCGAATG CAGCCTCCGG TCTGACTATC
GGCATCATGA ATGGCCTTGT CACGGCTATT CCCGGCATCG GCCCTGTTCT CAACATTCAT
ACGCTCATCC GCGCGCTGGA AACGGATGCC AATGCCAACA TTCTTTCCAC CCCCACCCTG
CTGACACTGA ATAACGAAGA AGCCAGGATC ATCATCGGGC AGAACGTTCC GATTCCCACC
GGCCAATTCA TTCCGCCAGT AGGAGGCGCC GTTACCTCCC CGTTTCAAAC CGTTTCACGC
CAGGACGTGG GACTATCATT GAAGATCAAG CCCCTTATCT CGGAAGGCAA TACTGTCCGT
GTGCAGATTT TTCAGGAAGT CTCGAGCGTC GTTCCTGGCA CGGTCAACGC CACCAACGGG
TTGATTACCA ACAAACGCTC GATAGAATCG ACAGTGCTGG TTGACGACGG GCAGATTCTC
GTGCTCGGCG GTCTGATGCA GGATTCGGTA AATGACTCGG TTGAAAGAAT TCCACTGGTC
GGGGCGATTC CGCTGTTCGG ACAATTGTTC AGTTACAACA AGCGCTCACG CAACAAAACC
AATCTGATGG TATTCCTGCG GCCGACGCTG ATGCGCGCGG GCGACGCCGC CGATCCGCTT
TCTGACGCAC AGTACGATCG GGTGCTGGGC GAACAGAAAA AAGTGAGACC CAAGTTTAAT
CTTGTGCTTC CGGATATGGA ATCGCCTACT TTGCCGCCGC GTCAACCACC TCCTGTCATC
CTTGATGACA GCATCACTCC CGATGATCCC GGAATTTCCA ATGTTCAAGG CAACTGGGAT
ACCGGGGGAG TGATGGATAA TACACCCTGA
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| Protein sequence | MGYRGKIVRH RSLCAVFLWM AVAGWVTEAW AVNPSATLPV EEIGVPPSVL PEADSLRASK
SRSSAGQDLV TLNFVNADIE GVVKAVSEIT RKNFMLDPRV KGTINIVSAK PVPRSSVYEV
FLSALRLHGY AVVEDYGIIR IVPESDAKLY QGPTLGPTNK RQLAGDRIQT QVFTLQYESA
VQMVPILRPL IAPNNSITAN PNSNTLVITD YASNLQRLAK IIDSVDQPSG TEPVSIPLQH
ASAIDVAQTV NRLFSESTQS QAEGAADPTQ QRFTVVADAR SNTLLARSGN RAALARLRQL
VTVLDSPTSA AGNMHVVFLK NADAVRLAET LRAIYHNMAS PVSSSSGLSQ GTGTAFGTSS
LGTSTGGGMG ASSGTSTGGS MGTSMPGSSL GAGTVPAAST VTPAPMQTGA TSATPGIIQA
DAATNSIIIT APDAIYNNLR AVVEKLDVRR VQVYIEALIA EITADRAAEF GIQWQNLSNA
AQGGTQVFGG TNFNAGTAGG GSIISTAQNP IANAASGLTI GIMNGLVTAI PGIGPVLNIH
TLIRALETDA NANILSTPTL LTLNNEEARI IIGQNVPIPT GQFIPPVGGA VTSPFQTVSR
QDVGLSLKIK PLISEGNTVR VQIFQEVSSV VPGTVNATNG LITNKRSIES TVLVDDGQIL
VLGGLMQDSV NDSVERIPLV GAIPLFGQLF SYNKRSRNKT NLMVFLRPTL MRAGDAADPL
SDAQYDRVLG EQKKVRPKFN LVLPDMESPT LPPRQPPPVI LDDSITPDDP GISNVQGNWD
TGGVMDNTP
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