Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1855 |
Symbol | |
ID | 3786597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2138266 |
End bp | 2139213 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637811940 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_412542 |
Protein GI | 82702976 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACCA GGTCATCGCC GTCCCCCGAG GCGGTCAGAC GACGCCGTTC CATGAAAATC ACAAAGTCTC CCGCTTCGTC AACTCCGGCA GACTCACCCA AATCACTCCA ATCGCCTGTA CGAAGCCGGC TGAGAGGAGC GGGGCTAAAG GGATCGATAA AACCCGCGGC AACACCTCAA TCTGGCGTGG GTTCCACCTC CCCTCAACCC GTTACGCAGA AATTGCACAA GGTGCTGGCC CAGGCGGGAT TGGGTTCGAG ACGCGAAATG GAAGAGCTGA TCGCCAGTGG ACAGGTGACG ATCAACGGAA AGACCGCACA AGTGGGGGAC CGTATCGCCG CTCGAGATGT CGTGAGAGTA GGGAAGCGCG TCGTTCACTT CAGATCCGCC CGCCGTCTGC CCCGCGTCAT GCTCTATCAC AAGCCGGAGG GGGAAATCGT CAGCCAGGAT GATCCCCAAG GCCGTACGTC GGTCTTCGAC AAACTGCCGC AGTTGAGGTC GTCCAAATGG ATTGCTATTG GCAGGTTGGA TTACAACACC AGCGGTTTGC TGGTTTTCAC CACGGATGGG GAATTGGCCA ACCGGCTGAT GCATCCGCGC TTCGAAGTCG AGCGCGAATA CGCAGTGCGG ATCATCGGAA GGCTGACGCC GGAGCAGGCA ACGTTGCTGA CCTCGGGTGT TGAGCTGGAG GACGGCGCGG CCAAGTTCGA TTACCTGTCG GATGAAGGGG GTGAGGGCTC CAACCACTGG TATCGCGTGA TATTGAAGGA AGGCAGGAAT CGCGAAGTAC GGCGGATGTT CGAAGCGGTG GGAATGACGG TGAGCCGCCT GATGCGGGTT CGTTTTGGCC CTATCAACTT GCCCTCCCGT TTGAAACGGG GAAAGTCGAT GGAATTGAAC GAGGCAGAGA TAGGACGCCT GCTGGAACTG GTCGGTTACA AAGCCTGA
|
Protein sequence | MKTRSSPSPE AVRRRRSMKI TKSPASSTPA DSPKSLQSPV RSRLRGAGLK GSIKPAATPQ SGVGSTSPQP VTQKLHKVLA QAGLGSRREM EELIASGQVT INGKTAQVGD RIAARDVVRV GKRVVHFRSA RRLPRVMLYH KPEGEIVSQD DPQGRTSVFD KLPQLRSSKW IAIGRLDYNT SGLLVFTTDG ELANRLMHPR FEVEREYAVR IIGRLTPEQA TLLTSGVELE DGAAKFDYLS DEGGEGSNHW YRVILKEGRN REVRRMFEAV GMTVSRLMRV RFGPINLPSR LKRGKSMELN EAEIGRLLEL VGYKA
|
| |