Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1700 |
Symbol | |
ID | 3784799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 1939445 |
End bp | 1940905 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637811787 |
Product | homospermidine synthase |
Protein accession | YP_412390 |
Protein GI | 82702824 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5310] Homospermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.914151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGGA GGATTAATTT CGATATGGAA ATGAAAGCGC ACAAGCAGGC AAACACCAAA CACGCGCATC TGCAGGGGAA TTTGATAATA GTGGGTTTTG GCAGCGTAGG CCAGGCTTTG CTTTCGTTAT TGTTTCAGAA TATCGAGATT CGTTCCGATC AGGTGAGGAT AATCACAGCT GATGAACATG GCAGTGAAAT CGCTAGCAAA TTTAGCGTCT CATTCACACC CCATTCGCTG ACCGAGGAAA ATTATCTCGC TGTGCTGGAG CCTTGGCTCG ATGAGGGAGA TTTCCTGCTT AATCTCGCCG TAGACGTTTC CAGCCTTGCT CTAATGGAAT TGTGCTGGCG GCGAGGCGCA TTGTACCTGG ACACTTGCAT TGAACCCTGG GCCGGTGGAT ATGTTGACCG ATCCGTTTCC CCGTCCTTGC GTTCCAATTA TGCGCTGCGT GAGCAAGCAC TCGCTTTTGC GCGGGAAAAG CAGGAAGGCC CCACCGCGCT TCTGTCGCAC GGCGCGAATC CGGGTCTTGC CTCGACATTT GCGAAACAGG CATTACTGAA CATTGCTGCG GACACCGGCA TGGCAGTGAA AAAACCCACA AACTCCTGCG AATGGGCACA ACTTGCGTAT CAGCTCAATA TAAAAGCAAT TCATATTGCA GAGCGTGATA CCCAGGCTGC TTCTCAACGC AAACAGCCCA ATGAGTTTGT CAACACCTGG TCGGTGGATG GTTTTGTCGG TGAAGGTCTT CAGCCATCGG AACTGGGATG GGGGACTCAT GAACGCCATT GGCCGGTGGA TGGAGCGCAT CATGGATTCG GATGCGATGC CGCCATCTAT CTCAACCGCC CCGGCGCTTC TACCCGCGCG CGCAGTTGGA CACCCCTCGG CGGACCGTAT CACGGTTTTC TGATAACCCA TAACGAATCC ATCTCCATAG CCGACCATCT GACATTGAGA GAAAAGGGAG AGGTGATTTA CCGTCCAACG GTGCATTACG CTTATCTTCC CTGTGACGAT GCTGTACTTT CAGTTCACGA GCTTGCGGGC AGAAATTGGC AGATACAGGC GAAAAAACGC ATTCTTCGGG ATGAACTGGT GGAGGGGACG GACGAGCTTG GCGTGCTGCT CATGGGCCAC GCAAAATGCG CTTACTGGTA TGGATCCCGG TTATCCATAG GGGAAGCACG CCGGCTTGCC CGATTCAATA GTGCTACCAG CTTGCAGGTC GTAGCTGGCA TTCTTGCCGG AATGATATGG GCTCTGCAGA ATCCGAGATC GGGTGTAGTG GAACCTGAAG CAATCGACCA CGAGCTTGTC CTGGAGGTAG CCAAGCCCTA TCTGGGAGAG CTTGTGGGGA TCTATTCGGA CTGGACTCCG TTGCAGGATC GAGGATGGTT ATTTGACGAG GATGTCGACA GGGAGGATCC CTGGCAATTC AAGAATGTTC GCGTAACATA A
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Protein sequence | MRRRINFDME MKAHKQANTK HAHLQGNLII VGFGSVGQAL LSLLFQNIEI RSDQVRIITA DEHGSEIASK FSVSFTPHSL TEENYLAVLE PWLDEGDFLL NLAVDVSSLA LMELCWRRGA LYLDTCIEPW AGGYVDRSVS PSLRSNYALR EQALAFAREK QEGPTALLSH GANPGLASTF AKQALLNIAA DTGMAVKKPT NSCEWAQLAY QLNIKAIHIA ERDTQAASQR KQPNEFVNTW SVDGFVGEGL QPSELGWGTH ERHWPVDGAH HGFGCDAAIY LNRPGASTRA RSWTPLGGPY HGFLITHNES ISIADHLTLR EKGEVIYRPT VHYAYLPCDD AVLSVHELAG RNWQIQAKKR ILRDELVEGT DELGVLLMGH AKCAYWYGSR LSIGEARRLA RFNSATSLQV VAGILAGMIW ALQNPRSGVV EPEAIDHELV LEVAKPYLGE LVGIYSDWTP LQDRGWLFDE DVDREDPWQF KNVRVT
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