| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1404 |
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| Symbol | |
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| ID | 3786434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 1606903 |
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| End bp | 1610205 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637811492 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_412099 |
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| Protein GI | 82702533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGAG AAGAAGACCC GCTCTGGTAC AAGGATGCCA TTATCTATGA ATTGCACGTC
AAGACATTCT TCGACAGCAA TGGCGACGGC ATAGGAGACT TTTCGGGCCT GATTTCCAAG
CTCGACTATC TGGCGGAACT GGGCGTTACC GCGCTCTGGC TTCTTCCATT TTATCCGTCT
CCGGGACGGG ATGACGGTTA CGATATTTCC GATTATCACA ATGTGCACCC GGATGTCGGC
ACCCTGGAGG ACTTTCACCG GTTTATCGCG GAAGCTCACA GTCGAGGTTT ACGCGTAATC
ACGGAACTGG TGCTCAATCA TACTTCCGAT CAACATCCAT GGTTTCAGGC AGCGCGCCGC
GCCCCACCTG GGTCCGTCAA GCGCGACTAT TACGTATGGA GCGACGACAA CACCAAGTAC
AGCGGTGCAC GCAGTATTTT CACGGACACA GAGGGATCCA ACTGGGAATG GGATGATGTA
GCCCAGGCCT ATTACTGGCA CCGCTTTTTT TTCCATCAAC CGGACTTGAA TTTTGATAAC
CCCCATGTCT TTAACGCCAT GATGCATGTG ATGCGGCTTT GGCTGGACGC CGGTGTCGAT
GGCATGCGGC TGGATGCCAT GCCTTATCTG TGCGAGCGTG AGGGGACCAA CTGCGAAAAC
CTGCCGGAAA CTCATGCGGT GATCAAACGC ATGCGCTCCG AACTGGATAA ACACTACCGC
AACCGGATGT TCCTGGCTGA GGCGAACCAG TGGCCGGAGG ATGTACGCGA GTATTTTGGC
GAGGGCGACG AATGCCATAT GGCTTTCCAT TTCCCACTCA TGCCGCGAAT GTACATGGCT
ATTGCGCGCG AAGATCGTCA TCCCATTGTA GAGATCATGG AGCAGACACC AGACATCCCC
GAGAATTGTC AGTGGGCAGT GTTTCTGCGC AATCACGACG AACTGACATT GGAGATGGTC
ACCGACCGCG AGCGGGATTA TCTTCACCAG ACCTACGCAA TCGACCCTCA GGCCCGCCTG
CATCTCGGTA TTCGCCGGCG TCTGGCGCCG CTGATGGACA ATGACCGGCA CCGAATCGAA
TTGATGAATC TGCTGCTCAT GACCATGCCA GGGTCGCCCG TGCTCTACTA CGGAGATGAA
ATCGGTATGG GTGATGACCT TCTCCTCGGT GATCGAAATG GGGTGCGCAC GCCCATGCAG
TGGTCGGGTG CAGTTAACGG CGGATTTTCA ACGGCTGATT CTCAACGGCT TTTCCTGCCG
GCCATCATCG ACCCCGTATA TGGGTTTGGG GCAGTGAACG TGGACTCACA GAGACGGAAT
TCGTCATCCC TGCTCAACTG GATGAAGCGC CTGATTGCGA TGCGCAAGGC ACACCGGACC
TTTGGCCGGG GCACGCTGCG TTTTTTACGG CCTGGCAATC GCAAGATTCT TGCTTATCTG
CGTGAGCATG AGGATGAAAC GATTCTGTGC GTGGCTAATC TGTCCCGCGT CGCGCAGCCG
GTAGAGCTGG ATTTAAGCCA ATTCAGGGGA AGGGTACCGG TTGAATTGAT GGGGCGCACG
CCTTTCCCAC CCGTGGGTGA GCTGCCGTAT CTTCTTACCT TGAGCGCTCA TGGCTTTTAT
GCTTTTCGCC TGACAGCCGA TGTGGCCGCC CCTGCCTGGC ATGAGGAGCG GCAGGTATCG
CCGGATCTGC CTGTCCTTGT GCTTGTGGAT TCGGGTTGGG GCACCCTGTT GAACCGGGGC
GAGGGTAACG GGGGCATGAA AGACCTGATG GCTCGTCGTG CCCGCCAACA GCTCGAGGAG
CAGATCATGC CTCGCTTCTT TTATTCCCAA CCCTGGTTTT TGATGCGAAA TCTCCCCGTC
AGAAAATTTG AGCTGGGGGA GATGCACGAG TGGTCCGCGG AGCAGGGAAG CTGGCTGCTT
GCCACCGTTG TTTTAACGCT GGCCAATGAT GAGACTTATC GCTTTGCCGT GCCTTTGGCA
CTGGTGTGGG AGGACGAGGA TGAGGCGATT GTGAGCACGC TGCTGCATGC CACGCTTGCC
AAGGTTCGCC GCCGGGAGCG GACGGGCGTG CTGTTCGACG CCTTCTGGGA TGACGGCTTC
TGCCGCGCCG TGATCTCCAG CATGCATGAG GGTTCCGCAC TCCTGTTTAA GCGGGGGCAA
GTATCTTTCC ATGCGACCAC CGCTTTTCCC GGCCCGGTGG TTTCAGGCGC GTCAACAACG
GTGACCCGGA CAGTTTCGGA GAGAGGGCGA TTGTTCGTGA ACATGGGCGA CCGGCTGGTA
CTGAAAGGAT ACCGCTGGCT TCTTCCCGGC GTGCATCCCG AGCTGGAGAT GTCGCGTTTT
CTGACGGAGA CGGCAAAATT TACCCACATG GCGCAACTCG CCGGCACCGT GGAGTACACG
GACAGTGAGG AAGGCAATTC CACTCTGGCA ATCCTCGAGC ACTACGCCGA GAATCAGGGT
AGCGCCTGGG CTTATACACA GGACTATCTG CAACGCTACC TGGATGAATG CCGCACACAA
CAAAAGCGTC CCATTGATTC GCGGCATATT GCCTACATGA CCCTCATCAA TACGCTGGGA
TTGCGTACGG CGGAATTTCA CCGGGCACTT GCGCAGGATG ATGCAGAGGG AGCTTTCGGC
GTCGAGCCCA TTACCTCCGA AGATCTTGCG CAGTGGGCGA GCACCGTGCG TGCGCAGATG
GATGAAATGT ACAAATTGCT GGAAGCGAAA TGGCCGGATG TACCCAAATC CGCGCAGGAG
GCCGGCAACG ATCTTTTATC AGCCCGGTCG AAATTCTACC GTCGTATCAC CCGCCTTGCA
GCCATACATC CCCAGGCCTT GAAGGCGCGT TGTCATGGGG ATTACAGCCT GCGTCAGGTG
TGGCTCTCGA ATAATGATTT TCTGATTACG AATTACGGCG GCGGTGCCGA ACGCGCATGG
CGTGAGCGCC GCTGGAAACA GAGTCCCCTC CGCGATGTGG CAGGTATGCT GTTTTCGTTT
TCCGAGGTGG CGGCAGCGGC ACTGGAGCAT GTCACGGATG AATATCCGGA ATCAACCATT
ATGCTTGCAC AACAAGCTGA TAAATGGCGA GTGCTTGCCA GCGGCGATTT CCTCAAAAGC
TATCGCAGGG CGATGAAGGG AAATTCCCTG TTCCCCGCTG ATGCCGGAGT AACCGATGCT
TTGGTTACGC TCTTCATGGT GGAGAAAGCT GTTGCCAGCG TGAGTAACGC GCTCGCGCAA
CAATCGAAGG CAGTCGATGG AACCATGCAG CGACTGATAC GGCTGATGCA ACACAGAAGG
TAG
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| Protein sequence | MGREEDPLWY KDAIIYELHV KTFFDSNGDG IGDFSGLISK LDYLAELGVT ALWLLPFYPS
PGRDDGYDIS DYHNVHPDVG TLEDFHRFIA EAHSRGLRVI TELVLNHTSD QHPWFQAARR
APPGSVKRDY YVWSDDNTKY SGARSIFTDT EGSNWEWDDV AQAYYWHRFF FHQPDLNFDN
PHVFNAMMHV MRLWLDAGVD GMRLDAMPYL CEREGTNCEN LPETHAVIKR MRSELDKHYR
NRMFLAEANQ WPEDVREYFG EGDECHMAFH FPLMPRMYMA IAREDRHPIV EIMEQTPDIP
ENCQWAVFLR NHDELTLEMV TDRERDYLHQ TYAIDPQARL HLGIRRRLAP LMDNDRHRIE
LMNLLLMTMP GSPVLYYGDE IGMGDDLLLG DRNGVRTPMQ WSGAVNGGFS TADSQRLFLP
AIIDPVYGFG AVNVDSQRRN SSSLLNWMKR LIAMRKAHRT FGRGTLRFLR PGNRKILAYL
REHEDETILC VANLSRVAQP VELDLSQFRG RVPVELMGRT PFPPVGELPY LLTLSAHGFY
AFRLTADVAA PAWHEERQVS PDLPVLVLVD SGWGTLLNRG EGNGGMKDLM ARRARQQLEE
QIMPRFFYSQ PWFLMRNLPV RKFELGEMHE WSAEQGSWLL ATVVLTLAND ETYRFAVPLA
LVWEDEDEAI VSTLLHATLA KVRRRERTGV LFDAFWDDGF CRAVISSMHE GSALLFKRGQ
VSFHATTAFP GPVVSGASTT VTRTVSERGR LFVNMGDRLV LKGYRWLLPG VHPELEMSRF
LTETAKFTHM AQLAGTVEYT DSEEGNSTLA ILEHYAENQG SAWAYTQDYL QRYLDECRTQ
QKRPIDSRHI AYMTLINTLG LRTAEFHRAL AQDDAEGAFG VEPITSEDLA QWASTVRAQM
DEMYKLLEAK WPDVPKSAQE AGNDLLSARS KFYRRITRLA AIHPQALKAR CHGDYSLRQV
WLSNNDFLIT NYGGGAERAW RERRWKQSPL RDVAGMLFSF SEVAAAALEH VTDEYPESTI
MLAQQADKWR VLASGDFLKS YRRAMKGNSL FPADAGVTDA LVTLFMVEKA VASVSNALAQ
QSKAVDGTMQ RLIRLMQHRR
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