| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0861 |
|---|
| Symbol | |
|---|
| ID | 3784431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 979758 |
|---|
| End bp | 981521 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637810943 |
|---|
| Product | succinate dehydrogenase, flavoprotein subunit |
|---|
| Protein accession | YP_411556 |
|---|
| Protein GI | 82701990 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAGTAG CACGGCGAAA ATTCGATGCG GTCATCGTTG GCGCAGGCGG CGGCGGAATG
CGCGCAGCGC TGCAATTGTC GGAAGCGGGC CTCAAGGTGG CCGTACTGTC CAAGGTTTTC
CCCACCCGCT CCCATACGGT TGCCGCCCAA GGCGGCATCG CCGCGGCGCT CGGAAACGTC
ACCGAAGACA ACTGGCACTG GCACATGTAC GACACGGTAA AAGGTTCCGA TTATCTCGGC
GACCAGGACG CGATCGAATT CATGTGCCGC CAGGCAAGCG AAGTGGTATA TGAGCTCGAA
CATTACGGCA TGCCTTTCGA CCGGCTGGAA AACGGAAAGA TTTACCAGCG CCCTTTCGGG
GGGCAATCGC AGAATTTCGG GGGCGCACAG GCAACGCGTT CATGCGCCGT TGCTGACCGC
ACTGGCCATG CCATGCTGCA CACGCTTTAT CAGCGCAATG TGCGGGCAAA TACCCAGTTT
TTTGTCGAAT GGATGGGGCT CGATCTCATT CGTGACGAGC ATGGTGATGT GTTAGGCGTC
TCAGCGCTCG ACATCGAAAC CGGCGAAGTC ATGATCCTGC AGGCAAGAGC GACACTGTTT
GCAACCGGCG GGGGAGCACG GATATTCAGT GCCAGCACCA ATGCTTTCAT CAACACGGGC
GACGGTCTGG CGATGGCGGC GCGCGCGGGG GTGCCATTAC AGGACATGGA ATTCTGGCAG
TTTCACCCGA CGGGAGTATA TGGTGTAGGA ATCCTTATCA GCGAGGCGGT GCGTGGGGAA
GGCGGTTACC TGCTCAATAA GGACGGCGAG CGTTTCATGG AGCGCTATGC GCCGCATGCG
AAAGACCTTG CCAGCCGCGA TGTCGTCTCG CGCGCGATGA CGACGGAAAT CAAGGAAGGG
CGCGGATGCG GCAGGGACGC TGATCATCTG CTGCTAAAGC TGGATCATCT GGGAGGGAAC
GTTATCAAGG CGCGGCTGCC TGGCATACGT GAAATTGCCA TAAAGTTTGC TCACGCAGAC
CCGGTCCAGG AGCCCATTCC GGTAGTCCCC ACCGCGCATT ACATGATGGG AGGAATTCCG
ACGAATTTTC ATGGTCAGGT AGTAGCGCCC TACAAAACGG GCCCCGAGGA AGTGGTGCAG
GGATTCTATG CCGTGGGTGA ATGCGCGTGC GTATCCGTGC ATGGCGCCAA TCGGCTGGGA
ACCAATTCGC TGCTCGATAT ACTGGTATTC GGTCGCGCTG CGGGCAACCA GATCATCGAA
GACTTGAAAA GGAATACCCA TCATAAACAT TTACCCGGAG ACGCGGCAGA CAAGGCGCTC
GCCCGACTGG CGCGGCTGGA TTCCCGGAAG GACGGCGAGA ACGTGGCGCA GGTAGGGGAT
ATGCTGCGCA AGACCATGCA GGCGCATTGC GGCGTATTCC GTTTTGCAGA TTTGCTCAAG
CAAGGGGTCG ATAAAATCTC GGAAGTGGCG GAGCGCGTCA AAAATACCGA GATCAGGGAT
AAAAGCCGGG TGTTCAATAC TGCGCGGGTA GAAGCGCTGG AACTCGATAA TCTGGTGGAA
GTCGCCCTGG CGACGATGGT TTCGGCCCAA GCCCGCAAGG AAAGCCGGGG GGCCCATGCG
CGGGATGACT TTCCCCATCG TGATGACGAC AAGTGGCTCA AACACACATT GTATTTCAGC
GAAGACCGGC GACTCGATTA CAAGCCGGTA CGGCTGAAGC CCTTGACGGT CGAATCCTTT
CCACCGAAGG CACGAACTTA TTAG
|
|---|
| Protein sequence | MTVARRKFDA VIVGAGGGGM RAALQLSEAG LKVAVLSKVF PTRSHTVAAQ GGIAAALGNV
TEDNWHWHMY DTVKGSDYLG DQDAIEFMCR QASEVVYELE HYGMPFDRLE NGKIYQRPFG
GQSQNFGGAQ ATRSCAVADR TGHAMLHTLY QRNVRANTQF FVEWMGLDLI RDEHGDVLGV
SALDIETGEV MILQARATLF ATGGGARIFS ASTNAFINTG DGLAMAARAG VPLQDMEFWQ
FHPTGVYGVG ILISEAVRGE GGYLLNKDGE RFMERYAPHA KDLASRDVVS RAMTTEIKEG
RGCGRDADHL LLKLDHLGGN VIKARLPGIR EIAIKFAHAD PVQEPIPVVP TAHYMMGGIP
TNFHGQVVAP YKTGPEEVVQ GFYAVGECAC VSVHGANRLG TNSLLDILVF GRAAGNQIIE
DLKRNTHHKH LPGDAADKAL ARLARLDSRK DGENVAQVGD MLRKTMQAHC GVFRFADLLK
QGVDKISEVA ERVKNTEIRD KSRVFNTARV EALELDNLVE VALATMVSAQ ARKESRGAHA
RDDFPHRDDD KWLKHTLYFS EDRRLDYKPV RLKPLTVESF PPKARTY
|
|---|
| |