Gene Nmul_A0570 details

Gene Information

• Locus tag: Nmul_A0570
• Symbol: rimM
• ID: 3784790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 657071
• End bp: 657577
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637810652
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_411270
• Protein GI: 82701704
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.115494
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGATAA TGGGCCGCGT TGCCGGTCCA TATGCGGTAG CCGGCTGGAT CAAGGTTTTT 
CCCTATACCG AATATGTGGA TGGCTTGCTG GATTACCCGG ACTGGTGGCT GGGCAGCGAG 
GGCGGCAAAT GGCACAAATT CAAAGTGATC GAGGGCGAGG TTCACGGGAG CGTATTGCTG 
GCCTCACTTG AACAATGTGC GGACCGTGAC GCGGCTGCGC GGCTAAAGGG ACTGAAGATC 
GCCATTCCAC GCAGGCTGCT GCCGGCATTG CCGGAAAGCG GCGAGGAAGG TTATTACTGG 
TCGGATCTCA TTGGGCTTGC AGTCATCAAT CTGCAGGGTG AGGTGCTGGG TAAGGTGGCG 
GGGCTGCTGG AAACCGGAGC GAACGATGTG CTTCAGGTGC AAAATCCGGA AGAAACCGAA 
AGACTGATAC CTTTCATAGA CCAGGTGATC ATCAAAGTCG ATCTGGCGGC GGGTCGGATT 
ACGGTGGATT GGGGTCTGGA CTACTGA 

 

Protein sequence

MVIMGRVAGP YAVAGWIKVF PYTEYVDGLL DYPDWWLGSE GGKWHKFKVI EGEVHGSVLL 
ASLEQCADRD AAARLKGLKI AIPRRLLPAL PESGEEGYYW SDLIGLAVIN LQGEVLGKVA 
GLLETGANDV LQVQNPEETE RLIPFIDQVI IKVDLAAGRI TVDWGLDY