Gene Nmul_A0487 details

Gene Information

• Locus tag: Nmul_A0487
• Symbol: thrS
• ID: 3784904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 545984
• End bp: 547900
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637810563
• Product: threonyl-tRNA synthetase
• Protein accession: YP_411187
• Protein GI: 82701621
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.348528
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTGTAG TTCGTTTGCC GGATGGTTCG GAGCGCGTGT ATGAGCATTC TGTAACGGTG 
GGTGAAGTTG CAGCTTCGAT AGGCGCCGGG CTGGCTCGCG CTGCGCTTGC AGGCAAGGTG 
AACGGCAAAC TGGTTGACCT TTCCGCTCGT ATCGAAAATG ACAGCGACGT AGCCATCATC 
ACGGAAAAGG ATGCGGAAGG GCTCGAGATC ATCCGGCATT CCAGCGCCCA TTTGCTGGCG 
CATGCGGTGA AAGAATTGTT TCCGGAAGCG CAGGTCACGA TTGGACCGGT AATCGAGGAC 
GGATTTTATT ACGATTTTTC CTATAAGCGA CCCTTTACCC CCGAAGATCT GGCGGCAATC 
GAGAAACGCA TGGCTGAAAT CAGCACGCGC AACCTGAAGG TCGAGCGCCA GGTTTGGGAT 
CGATCCGAGG CAATCAATTT TTTCAAGAAC CAGGGCGAAC ACTATAAGGC GCAGATCATC 
GAAGCCATTC CCGGCGATGA GGACGTTTCC CTGTATTCTC AGGGAAATTT TACCGATTTA 
TGCCGCGGTC CCCACGTCCC GGCCACATCC CGTCTGAAGG TTTTCAAGCT GATGAAGCTT 
GCAGGCGCCT ATTGGCGTGG GGATTCGCAT AACGAAATGC TGCAGCGGAT CTATGGCACC 
GCATGGACCA ATAAAGACGA TCAGAACGCC TATCTGCGCC GTCTTGAAGA GGCGGAGAAA 
CGCGATCACC GCAAGCTCGG CAAGCAACTG GGTCTGTTTC ACCTTCAGGA AGAAGCGCCT 
GGAATGGTGT TCTGGCACCC GAAGGGATGG GTCGTCTGGC AGCAGGTCGA ACAGTACATG 
CGGGACATCT TTCGTAATAA CGGCTATCTC GAAATCCGCA CGCCCTCCGT ACTGGACAAG 
GGTTTGTGGG AGCGTTCCGG ACACTGGGAA AACTTCCGCG AGAACATGTT CGTGACGCAG 
GCCGAAGATC GGGAATTTTC CGTCAAGCCG ATGAATTGTC CGGGGCATGT GCAGGTGTTC 
AAGCAGGGGC TGAAAAGTTA TCGCGACCTG CCGCTCCGGC TCGCGGAATT CGGTTCCTGT 
CACCGTAACG AGCCCTCCGG AGCGCTGCAC GGGATCATGC GGGTGCGAGC GTTCACTCAG 
GACGACGCTC ACATTTTCTG CACTGAGTCC CAGGTGCAAG ATGAGGCCGT CCAGTTTATC 
GATCTGTTGC AGAAGGTTTA CAACGATTTT GGCTTTAATG ACATCCTGGT GAAACTTTCC 
ACCCGTCCCG CAAAGCGCGT AGGCTCCGAA GAGCAGTGGG ACAAGGCGGA AGAGGCGCTG 
CGATCCGCGC TGAATCACAA AAACCTCATC TGGGAACTGC AACCGGGTGA AGGTGCGTTC 
TACGGACCAA AAATAGAGTT TTCGCTCAAG GATAGTATCG GTCGCATCTG GCAGTGCGGC 
ACCTTGCAAC TGGATTTTTC CATGCCGGAA CGCCTCGGCG CAGAGTTTGT GGCCGAGGAT 
AACTCCCGGC AGATACCGGT AATGCTTCAC CGCGCAATCC TCGGCTCCCT GGAACGTTTT 
ATCGGCATTC TTATCGAAAA TCATGCGGGA GCACTGCCGC TATGGTTGTC CCCGGACCAT 
GCGGTCGTGC TGAATATCTC GGAAGGGCAG GCCGATTATG CCCGAGAAGT GACCGAAGAA 
CTCAGAAGAG CGGGAATTCG AGCGTATGCG GACTTGAGAA ATGAAAAAAT AACTTATAAA 
ATACGGGAGC ATAGTCTGCA AAAACTGCCC TATCAAATCA TCGTGGGTGA TAAGGAAGTG 
GCAGCCCAGA GAGTGGCTGT ACGTACCCGC AGTGGCTCTG ACCTTGGTCA GATGACATTG 
CCGGCATTGG TGGACCGGCT TAAGGAAGAG ATTCGCACCC GGGCGGGGGC GGCCTGA 

 

Protein sequence

MAVVRLPDGS ERVYEHSVTV GEVAASIGAG LARAALAGKV NGKLVDLSAR IENDSDVAII 
TEKDAEGLEI IRHSSAHLLA HAVKELFPEA QVTIGPVIED GFYYDFSYKR PFTPEDLAAI 
EKRMAEISTR NLKVERQVWD RSEAINFFKN QGEHYKAQII EAIPGDEDVS LYSQGNFTDL 
CRGPHVPATS RLKVFKLMKL AGAYWRGDSH NEMLQRIYGT AWTNKDDQNA YLRRLEEAEK 
RDHRKLGKQL GLFHLQEEAP GMVFWHPKGW VVWQQVEQYM RDIFRNNGYL EIRTPSVLDK 
GLWERSGHWE NFRENMFVTQ AEDREFSVKP MNCPGHVQVF KQGLKSYRDL PLRLAEFGSC 
HRNEPSGALH GIMRVRAFTQ DDAHIFCTES QVQDEAVQFI DLLQKVYNDF GFNDILVKLS 
TRPAKRVGSE EQWDKAEEAL RSALNHKNLI WELQPGEGAF YGPKIEFSLK DSIGRIWQCG 
TLQLDFSMPE RLGAEFVAED NSRQIPVMLH RAILGSLERF IGILIENHAG ALPLWLSPDH 
AVVLNISEGQ ADYAREVTEE LRRAGIRAYA DLRNEKITYK IREHSLQKLP YQIIVGDKEV 
AAQRVAVRTR SGSDLGQMTL PALVDRLKEE IRTRAGAA