| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0131 |
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| Symbol | |
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| ID | 3785779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 136565 |
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| End bp | 137578 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637810201 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_410832 |
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| Protein GI | 82701266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.1484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG GTTCTCATAC TCTCAAAAAC AACCTTATCG TGGCGCCTAT GGCGGGAGTG
ACAGATCGCC CGTTCAGGCA ATTGTGCAAA AGCATGGGCG CCGGAATGGC TGTGTCCGAA
ATGGTGTCGA GCAATTCGCT CCTCTGGGGT TCCGAGAAGA CACGCCGCCG CGCCAATCAT
GAAGGCGAGG TGGATCCGAT CTCGGTGCAG ATCGCCGGCG CCGACCCGGC GATGATGGCG
GAAGCTGCGC GCTACAATGT CGCGCAAGGA GCCCAGATCA TCGACATCAA CATGGGTTGC
CCTGCCAAGA AGATTTGTAA TGTCATGGCA GGCTCTGCAT TGCTGCAGGA CCCGCCGCTG
GTCGGGCGGA TTCTGGATGC CGTCATAGGC GCGGTGAGGG TGCCTGTCAC CCTCAAGATT
CGCACGGGGT GGGATACCCA GCACAAGAAT GCGCTCTCCA TTGCCCGCAT TGCGGAGAAT
GCCGGCATCC AGGCGCTTGC TATCCATGGA CGTACGCGCG CCTGTGCTTA CACCGGCCAT
GCCGAATACG ATACCATCGC GGCAGTCAAG GCTGAGGTGC GGATTCCCGT TGTCGCCAAT
GGGGACATTA CAACACCGGA AAAAGCAAAA CACGTGCTTG ACTACACGGG AGCGGATGCG
GTCATGATCG GCCGCGCAGC ACAAGGCCGC CCCTGGATTT TTCGCGAGAT CGATCACTAT
CTGGCTACCG GCTCACACCT TCCGCTGCCT GAAGTAGCGG AGATTCACCG TGTACTCGTC
GCACATTTGC ACGATCTATA TAGCTTCTAT GGCGAGTATT CGGGGGTCCG CATCGCCCGC
AAGCATATTT CCTGGTATAC CAAAGGACTG GTCGGGTCAG CGGGTTTCCG TCATGCCATG
AACCAGCTGC AGTCTACGGA CCAGCAGCTG TCTGCGGTTA ACGACTTTTT CAGTGAGCTT
GCCGGCTACG GGCGGCGGTT GACCTACGTC GAGGCTGAGG AACTGGTGGC ATGA
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| Protein sequence | MKIGSHTLKN NLIVAPMAGV TDRPFRQLCK SMGAGMAVSE MVSSNSLLWG SEKTRRRANH
EGEVDPISVQ IAGADPAMMA EAARYNVAQG AQIIDINMGC PAKKICNVMA GSALLQDPPL
VGRILDAVIG AVRVPVTLKI RTGWDTQHKN ALSIARIAEN AGIQALAIHG RTRACAYTGH
AEYDTIAAVK AEVRIPVVAN GDITTPEKAK HVLDYTGADA VMIGRAAQGR PWIFREIDHY
LATGSHLPLP EVAEIHRVLV AHLHDLYSFY GEYSGVRIAR KHISWYTKGL VGSAGFRHAM
NQLQSTDQQL SAVNDFFSEL AGYGRRLTYV EAEELVA
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