| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2596 |
|---|
| Symbol | |
|---|
| ID | 3775193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2678860 |
|---|
| End bp | 2679921 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637801050 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_401613 |
|---|
| Protein GI | 81301405 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.724229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG CTGCTGCGCA AGCCCTCAGC AAGCGGGTCA AGCCGATCCG CGTCGGCGTG
ATTGGCGTCG GTCACATGGG CCAACACCAT GCCCGTGTCC TTAGCTTTTT GAAAGATGTT
GAGCTCGTTG GAATCGCTGA TGTTGATGTC GAGCGAGGCC TAGAAACTGC CAGCAACTAT
CGGATTCGCT ACTTCGAAGA CTATCGGGAG CTTTTAACGC TGGTCGATGC GGTCTGTATC
GCCGTTCCCA CCAAGCTGCA TCACGATGTG GGCATGACCT GTTTGGCGGC TGGCGTCCAT
GTACTGATCG AAAAACCGAT CGCAGCCAGC TTGGCCGAGG CAGAATCCTT GGTCAATGCA
GCAGCGGAAG CCCAATGCAT TCTCCAAGTC GGCCATATCG AGCGCTTTAA CCCCGCTTTC
CAAGAGCTGA GCAAAGTCCT CAAGACTGAA GAAATTCTGG CTTTGGAAGC TCATCGGATG
AGCCCCTACG CTCAGCGGGC TAACGATGTC TCCGTTGTCT TGGATTTGAT GATCCATGAC
ATTGACTTGT TACTGGCTCT AGCTAATGCA CCCGTCACCC AAGTCAGTGC GCGCGGCAGC
AAGGCTTTGG GTTCTGAGCA ACTGGACTAT GTGACAGCGA CCCTGAGTTT TGCTAACGGC
ATCATCGCTA CTCTGACGGC CAGCAAAGTC ACCCATCGCA AGATCCGCCG CATTGCTGCT
CACTGCCGCA ACTGCCTGAC TGAAGCAGAT TTTCTCAACA GCGAAATTCT GATTCACCGC
CAAACAACGA CCCATCTGTC GAGTGACTAT GGCCAAGTGC TCTACCGCCA AGATGGTCTG
ATTGAGAAAG TTTCAACCAG CAATATCGAA CCGTTGCACG CTGAGCTGGA GCATTTCGTC
AACTGCGTGC GTGGCGGCGA CCAGCCCTCC GTTGGCGGTG AGCAGGCAAT TAAAGCGCTG
CGCTTGGCCC GCGAAATTGA AACGATGGCG CTGGATGGGC GACCTTGGCA AAGCGGGCGT
GAAGCAGGAG TGGCCACAGA GATCACGCCA ATTCTTCCCT AG
|
|---|
| Protein sequence | MSAAAAQALS KRVKPIRVGV IGVGHMGQHH ARVLSFLKDV ELVGIADVDV ERGLETASNY
RIRYFEDYRE LLTLVDAVCI AVPTKLHHDV GMTCLAAGVH VLIEKPIAAS LAEAESLVNA
AAEAQCILQV GHIERFNPAF QELSKVLKTE EILALEAHRM SPYAQRANDV SVVLDLMIHD
IDLLLALANA PVTQVSARGS KALGSEQLDY VTATLSFANG IIATLTASKV THRKIRRIAA
HCRNCLTEAD FLNSEILIHR QTTTHLSSDY GQVLYRQDGL IEKVSTSNIE PLHAELEHFV
NCVRGGDQPS VGGEQAIKAL RLAREIETMA LDGRPWQSGR EAGVATEITP ILP
|
|---|
| |