Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2588 |
Symbol | |
ID | 3775185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2671412 |
End bp | 2672932 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637801042 |
Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
Protein accession | YP_401605 |
Protein GI | 81301397 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.884779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGAG ATTTACGCGG ATTTCTCAAG TTGCTCGAAG AACGCGGCCA GCTCCGCCGG ATTACGGCGC CCGTCGATTC TGATCTGGAG ATCGCGGAGA TTTCTAACCG CCTCTTGGCA GCGGGTGGCC CTGCCCTGCT ATTCGAAAAC GTCAAAGGCA CGGATTGGCC GGTGGCCGTC AATCTCCTCG GCACCGTCGA GCGGGTTTGC TGGGCGATGA ACTTCGAGGA GCCCAAGCAG CTCGAGGATT TGGGCCGCAA GCTCGGCATG CTCCAGCAAC CGAAGCCACC GAAGAAAATC TCGCAGGCGG TGGAGTTCGG CAAAGTGCTC TTCAGCTTGG TGCGTGCGAA ACCTCAGCGC GATTTGTTGC CGCCCTGCCA TCAAGTTGTG CTCAAGGGAG ATGAGGTCAA CCTCGATCGC ATCCCAATGA TTCGACCCTA TCCCGGTGAT GCGGGCAAAA TCATCACCCT CGGCTTGGTA ATTACTAAGG ATCCTGAGAC GGGGACGCCG AACGTCGGCG TTTACCGGCT GCAACAGCAG TCAGTCAATA CGATGACCGT GCATTGGCTC TCAGTGCGGG GCGGCGCCCG TCACTTGCGC AAAGCAGCGG AGCGCGGCCA GAAGTTAGAA GTTGCGATCG CCCTTGGGGT GGATCCACTG ATCCTGATGG CAGCGGCGAC CCCAATTCCC GTCGATCTGT CCGAGTGGCT CTTTGCCGGA CTCTATGGCG GCAGCGGCGT TCATTTGGCC AAGTGCAAAA CTGTCGATCT GGAAGTGCCC GCCGATTCCG AGATTGTCCT CGAAGGCACG ATTACGCCGG GGGAAGTGCT GCCCGATGGG CCGTTTGGCG ACCACATGGG CTATTACGGC GTGGTCGAAG ATTCACCGCT GGTGCGCTTC CATTGCCTGA CCCATCGGCG CGACCCGATT TATCTGACGA CCTTTAGCGG TCGCCCACCG AAGGAAGAGG CAATGATGGC GATCGCGCTC AACCGCATCT ACACGCCGAT TCTGCGCCAG CAAGTGCCGG AGATCGTCGA TTTCTTCCTG CCGATGGAAG CCCTGAGCTA TAAGGCCGCG GTGATCAGTA TCGATAAAGC CTACCCGGGC CAAGCGCGCC GCGCGGCGCT CGCCTTTTGG AGTGCGCTGC CGCAGTTCAC TTACACGAAG TTTGTAATTG TTGTCGATCG CGAGATCAAC ATCCGCGATC CGCGCCAAGT GATTTGGGCG GTGACTTCCA AAGTGGATCC CGAGCGTGAC GTCTTCATCC TGCCAGAAAC ACCGTTTGAT ACCCTCGACT TTGCAAGTCC AAAACTCGGT CTTGGTAGCC GCATGGGTAT CGATGCCACC ACCAAGGTCT ATCCCGAAAC CGATCACCAG TGGGGTGAAC CGCTGCGATC GGATCCAGCG ATCGCGGAGC AAGTCACGCA GCGCTGGGCG GAATATGGTC TGGCCGATCT GAAGTTGGAC GAGGTTGATC CCAACCGCTT TGGCTACGAA ATGCCCCCTA TCCGGTCTTA G
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Protein sequence | MPRDLRGFLK LLEERGQLRR ITAPVDSDLE IAEISNRLLA AGGPALLFEN VKGTDWPVAV NLLGTVERVC WAMNFEEPKQ LEDLGRKLGM LQQPKPPKKI SQAVEFGKVL FSLVRAKPQR DLLPPCHQVV LKGDEVNLDR IPMIRPYPGD AGKIITLGLV ITKDPETGTP NVGVYRLQQQ SVNTMTVHWL SVRGGARHLR KAAERGQKLE VAIALGVDPL ILMAAATPIP VDLSEWLFAG LYGGSGVHLA KCKTVDLEVP ADSEIVLEGT ITPGEVLPDG PFGDHMGYYG VVEDSPLVRF HCLTHRRDPI YLTTFSGRPP KEEAMMAIAL NRIYTPILRQ QVPEIVDFFL PMEALSYKAA VISIDKAYPG QARRAALAFW SALPQFTYTK FVIVVDREIN IRDPRQVIWA VTSKVDPERD VFILPETPFD TLDFASPKLG LGSRMGIDAT TKVYPETDHQ WGEPLRSDPA IAEQVTQRWA EYGLADLKLD EVDPNRFGYE MPPIRS
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